Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CEACAM3P40198 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CEACAM3P40198 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CEACAM3P40198 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CEACAM3P40198 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CEACAM3P40198 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CEACAM3P40198 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.53□□□□□ -0.08
CEACAM3P40198 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.53□□□□□ -0.08
CEACAM3P40198 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.53□□□□□ -0.08
CEACAM3P40198 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.53□□□□□ -0.08
CEACAM3P40198 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CEACAM3P40198 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CEACAM3P40198 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CEACAM3P40198 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CEACAM3P40198 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CEACAM3P40198 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.53□□□□□ -0.08
CEACAM3P40198 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.52□□□□□ -0.08
CEACAM3P40198 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CEACAM3P40198 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CEACAM3P40198 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CEACAM3P40198 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CEACAM3P40198 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CEACAM3P40198 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CEACAM3P40198 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.52□□□□□ -0.08
CEACAM3P40198 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CEACAM3P40198 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CEACAM3P40198 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CEACAM3P40198 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
CEACAM3P40198 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.52□□□□□ -0.08
CEACAM3P40198 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CEACAM3P40198 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CEACAM3P40198 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CEACAM3P40198 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CEACAM3P40198 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CEACAM3P40198 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.52□□□□□ -0.09
CEACAM3P40198 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CEACAM3P40198 RN7SL606P-201ENST00000472779 293 ntBASIC14.52□□□□□ -0.09
CEACAM3P40198 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CEACAM3P40198 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.52□□□□□ -0.09
CEACAM3P40198 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CEACAM3P40198 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.52□□□□□ -0.09
CEACAM3P40198 Z69720.1-201ENST00000601483 472 ntBASIC14.52□□□□□ -0.09
CEACAM3P40198 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.52□□□□□ -0.09
CEACAM3P40198 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CEACAM3P40198 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CEACAM3P40198 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CEACAM3P40198 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CEACAM3P40198 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.52□□□□□ -0.09
CEACAM3P40198 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.52□□□□□ -0.09
CEACAM3P40198 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.52□□□□□ -0.09
CEACAM3P40198 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.52□□□□□ -0.09
CEACAM3P40198 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CEACAM3P40198 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CEACAM3P40198 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CEACAM3P40198 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CEACAM3P40198 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CEACAM3P40198 AP000997.3-201ENST00000623333 2250 ntBASIC14.52□□□□□ -0.09
CEACAM3P40198 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CEACAM3P40198 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.52□□□□□ -0.09
CEACAM3P40198 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CEACAM3P40198 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CEACAM3P40198 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.51□□□□□ -0.09
CEACAM3P40198 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CEACAM3P40198 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.51□□□□□ -0.09
CEACAM3P40198 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.51□□□□□ -0.09
CEACAM3P40198 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.51□□□□□ -0.09
CEACAM3P40198 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.51□□□□□ -0.09
CEACAM3P40198 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.51□□□□□ -0.09
CEACAM3P40198 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 AC093458.2-201ENST00000623150 629 ntBASIC14.51□□□□□ -0.09
CEACAM3P40198 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CEACAM3P40198 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.51□□□□□ -0.09
CEACAM3P40198 NEFHP1-201ENST00000412845 2629 ntBASIC14.51□□□□□ -0.09
CEACAM3P40198 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.51□□□□□ -0.09
CEACAM3P40198 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CEACAM3P40198 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms