Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXC8P31273 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HOXC8P31273 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXC8P31273 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 TNXA-203ENST00000507684 2038 ntBASIC19.29■□□□□ 0.68
HOXC8P31273 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXC8P31273 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.28■□□□□ 0.68
HOXC8P31273 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HOXC8P31273 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HOXC8P31273 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 AC211486.1-202ENST00000416371 468 ntBASIC19.28■□□□□ 0.68
HOXC8P31273 AC211476.1-201ENST00000503899 468 ntBASIC19.28■□□□□ 0.68
HOXC8P31273 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.28■□□□□ 0.68
HOXC8P31273 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.28■□□□□ 0.68
HOXC8P31273 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXC8P31273 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXC8P31273 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.28■□□□□ 0.68
HOXC8P31273 C20orf181-201ENST00000623918 480 ntBASIC19.28■□□□□ 0.68
HOXC8P31273 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXC8P31273 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXC8P31273 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.28■□□□□ 0.68
HOXC8P31273 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXC8P31273 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 AC098818.2-201ENST00000564925 2320 ntBASIC19.28■□□□□ 0.68
HOXC8P31273 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC8P31273 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXC8P31273 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXC8P31273 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.27■□□□□ 0.68
HOXC8P31273 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXC8P31273 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 MRPL20P1-201ENST00000400819 433 ntBASIC19.27■□□□□ 0.68
HOXC8P31273 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 ACTG1P4-201ENST00000425123 1122 ntBASIC19.27■□□□□ 0.68
HOXC8P31273 RPS8P6-201ENST00000426177 609 ntBASIC19.27■□□□□ 0.68
HOXC8P31273 RHOQP3-201ENST00000437982 621 ntBASIC19.27■□□□□ 0.68
HOXC8P31273 AC096734.2-201ENST00000562054 433 ntBASIC19.27■□□□□ 0.68
HOXC8P31273 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.27■□□□□ 0.68
HOXC8P31273 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC8P31273 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXC8P31273 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXC8P31273 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.27■□□□□ 0.67
HOXC8P31273 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HOXC8P31273 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXC8P31273 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXC8P31273 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.27■□□□□ 0.67
HOXC8P31273 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
HOXC8P31273 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC8P31273 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC8P31273 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC8P31273 FLJ13224-201ENST00000313737 1514 ntBASIC19.26■□□□□ 0.67
HOXC8P31273 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC8P31273 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HOXC8P31273 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HOXC8P31273 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.26■□□□□ 0.67
HOXC8P31273 MKNK2P1-201ENST00000437526 628 ntBASIC19.26■□□□□ 0.67
HOXC8P31273 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC8P31273 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HOXC8P31273 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.26■□□□□ 0.67
HOXC8P31273 AC010507.1-201ENST00000633895 436 ntBASIC19.26■□□□□ 0.67
HOXC8P31273 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC8P31273 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC8P31273 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC8P31273 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC8P31273 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC8P31273 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC8P31273 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXC8P31273 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXC8P31273 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HOXC8P31273 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXC8P31273 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms