Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.7■□□□□ 0.58
MMP8P22894 AL138831.2-201ENST00000606564 490 ntBASIC18.7■□□□□ 0.58
MMP8P22894 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
MMP8P22894 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
MMP8P22894 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MMP8P22894 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
MMP8P22894 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.7■□□□□ 0.58
MMP8P22894 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.7■□□□□ 0.58
MMP8P22894 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MMP8P22894 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.69■□□□□ 0.58
MMP8P22894 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
MMP8P22894 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP8P22894 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP8P22894 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MMP8P22894 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP8P22894 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.69■□□□□ 0.58
MMP8P22894 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.69■□□□□ 0.58
MMP8P22894 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.69■□□□□ 0.58
MMP8P22894 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP8P22894 AC246785.2-201ENST00000432512 513 ntBASIC18.69■□□□□ 0.58
MMP8P22894 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MMP8P22894 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.69■□□□□ 0.58
MMP8P22894 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.69■□□□□ 0.58
MMP8P22894 AC011840.4-201ENST00000578471 627 ntBASIC18.69■□□□□ 0.58
MMP8P22894 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MMP8P22894 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.69■□□□□ 0.58
MMP8P22894 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP8P22894 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.69■□□□□ 0.58
MMP8P22894 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP8P22894 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP8P22894 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MMP8P22894 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MMP8P22894 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP8P22894 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP8P22894 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP8P22894 IER3-202ENST00000376377 1350 ntBASIC18.68■□□□□ 0.58
MMP8P22894 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP8P22894 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP8P22894 SIRPAP1-201ENST00000448467 1770 ntBASIC18.68■□□□□ 0.58
MMP8P22894 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP8P22894 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP8P22894 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP8P22894 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP8P22894 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MMP8P22894 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP8P22894 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP8P22894 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MMP8P22894 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MMP8P22894 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP8P22894 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP8P22894 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP8P22894 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP8P22894 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.68■□□□□ 0.58
MMP8P22894 AC007967.3-201ENST00000434308 558 ntBASIC18.68■□□□□ 0.58
MMP8P22894 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
MMP8P22894 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.68■□□□□ 0.58
MMP8P22894 KRT18P35-201ENST00000510488 1269 ntBASIC18.68■□□□□ 0.58
MMP8P22894 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.68■□□□□ 0.58
MMP8P22894 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP8P22894 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MMP8P22894 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP8P22894 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.68■□□□□ 0.58
MMP8P22894 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP8P22894 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP8P22894 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.68■□□□□ 0.58
MMP8P22894 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP8P22894 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP8P22894 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP8P22894 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MMP8P22894 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MMP8P22894 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
MMP8P22894 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
MMP8P22894 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 TSSC2-201ENST00000450217 709 ntBASIC18.67■□□□□ 0.58
MMP8P22894 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.67■□□□□ 0.58
MMP8P22894 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.67■□□□□ 0.58
MMP8P22894 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.67■□□□□ 0.58
MMP8P22894 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.67■□□□□ 0.58
MMP8P22894 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.67■□□□□ 0.58
MMP8P22894 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP8P22894 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.67■□□□□ 0.58
MMP8P22894 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.67■□□□□ 0.58
MMP8P22894 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP8P22894 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms