Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AD000864.1-201ENST00000624076 2295 ntBASIC15.31■□□□□ 0.04
CCL1P22362 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CCL1P22362 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL1P22362 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL1P22362 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL1P22362 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL1P22362 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL1P22362 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.3■□□□□ 0.04
CCL1P22362 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CCL1P22362 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CCL1P22362 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CCL1P22362 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL1P22362 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.3■□□□□ 0.04
CCL1P22362 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.3■□□□□ 0.04
CCL1P22362 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL1P22362 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCL1P22362 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.3■□□□□ 0.04
CCL1P22362 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
CCL1P22362 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.3■□□□□ 0.04
CCL1P22362 LINC01311-201ENST00000565162 1445 ntBASIC15.3■□□□□ 0.04
CCL1P22362 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL1P22362 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.3■□□□□ 0.04
CCL1P22362 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CCL1P22362 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCL1P22362 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
CCL1P22362 AC073912.3-201ENST00000624414 853 ntBASIC15.3■□□□□ 0.04
CCL1P22362 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CCL1P22362 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL1P22362 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL1P22362 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.3■□□□□ 0.04
CCL1P22362 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL1P22362 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL1P22362 AC097374.2-201ENST00000618617 1306 ntBASIC15.29■□□□□ 0.04
CCL1P22362 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 PCDHA12-202ENST00000613593 2588 ntBASIC15.29■□□□□ 0.04
CCL1P22362 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL1P22362 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL1P22362 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL1P22362 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 RNF152P1-201ENST00000397754 604 ntBASIC15.29■□□□□ 0.04
CCL1P22362 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL1P22362 KRT18P38-201ENST00000449496 1282 ntBASIC15.29■□□□□ 0.04
CCL1P22362 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL1P22362 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL1P22362 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL1P22362 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.29■□□□□ 0.04
CCL1P22362 AL390719.2-201ENST00000606993 987 ntBASIC15.29■□□□□ 0.04
CCL1P22362 HYMAI.1-201ENST00000620949 238 ntBASIC15.29■□□□□ 0.04
CCL1P22362 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCL1P22362 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCL1P22362 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL1P22362 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL1P22362 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CCL1P22362 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL1P22362 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCL1P22362 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL1P22362 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL1P22362 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL1P22362 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms