Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AC132938.5-201ENST00000624980 1813 ntBASIC20.47■□□□□ 0.87
BMP3P12645 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
BMP3P12645 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BMP3P12645 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BMP3P12645 KRT18P55-202ENST00000578578 1546 ntBASIC20.47■□□□□ 0.87
BMP3P12645 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BMP3P12645 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BMP3P12645 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BMP3P12645 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.47■□□□□ 0.87
BMP3P12645 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BMP3P12645 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BMP3P12645 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.46■□□□□ 0.87
BMP3P12645 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.46■□□□□ 0.87
BMP3P12645 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
BMP3P12645 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BMP3P12645 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BMP3P12645 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BMP3P12645 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.46■□□□□ 0.87
BMP3P12645 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.46■□□□□ 0.87
BMP3P12645 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.46■□□□□ 0.87
BMP3P12645 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.46■□□□□ 0.87
BMP3P12645 AL020989.1-201ENST00000422979 469 ntBASIC20.46■□□□□ 0.87
BMP3P12645 LAGE3P1-201ENST00000425356 484 ntBASIC20.46■□□□□ 0.87
BMP3P12645 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.46■□□□□ 0.87
BMP3P12645 AC092910.1-201ENST00000482027 1129 ntBASIC20.46■□□□□ 0.87
BMP3P12645 IGHV3-22-201ENST00000520721 359 ntBASIC20.46■□□□□ 0.87
BMP3P12645 AC109462.3-201ENST00000573934 613 ntBASIC20.46■□□□□ 0.87
BMP3P12645 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.46■□□□□ 0.87
BMP3P12645 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
BMP3P12645 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
BMP3P12645 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BMP3P12645 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BMP3P12645 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
BMP3P12645 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
BMP3P12645 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
BMP3P12645 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BMP3P12645 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BMP3P12645 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BMP3P12645 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
BMP3P12645 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.45■□□□□ 0.86
BMP3P12645 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
BMP3P12645 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
BMP3P12645 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
BMP3P12645 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BMP3P12645 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BMP3P12645 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.45■□□□□ 0.86
BMP3P12645 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.45■□□□□ 0.86
BMP3P12645 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.45■□□□□ 0.86
BMP3P12645 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.45■□□□□ 0.86
BMP3P12645 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.45■□□□□ 0.86
BMP3P12645 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.45■□□□□ 0.86
BMP3P12645 PMS2P1-201ENST00000431037 1228 ntBASIC20.45■□□□□ 0.86
BMP3P12645 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.45■□□□□ 0.86
BMP3P12645 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.45■□□□□ 0.86
BMP3P12645 AC105339.3-201ENST00000560043 636 ntBASIC20.45■□□□□ 0.86
BMP3P12645 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.45■□□□□ 0.86
BMP3P12645 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BMP3P12645 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
BMP3P12645 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BMP3P12645 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
BMP3P12645 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
BMP3P12645 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.45■□□□□ 0.86
BMP3P12645 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.45■□□□□ 0.86
BMP3P12645 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.44■□□□□ 0.86
BMP3P12645 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.44■□□□□ 0.86
BMP3P12645 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
BMP3P12645 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
BMP3P12645 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.44■□□□□ 0.86
BMP3P12645 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
BMP3P12645 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.44■□□□□ 0.86
BMP3P12645 AC098831.1-202ENST00000438821 336 ntBASIC20.44■□□□□ 0.86
BMP3P12645 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.44■□□□□ 0.86
BMP3P12645 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.44■□□□□ 0.86
BMP3P12645 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.44■□□□□ 0.86
BMP3P12645 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.44■□□□□ 0.86
BMP3P12645 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.44■□□□□ 0.86
BMP3P12645 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.44■□□□□ 0.86
BMP3P12645 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
BMP3P12645 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.44■□□□□ 0.86
BMP3P12645 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
BMP3P12645 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BMP3P12645 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.44■□□□□ 0.86
BMP3P12645 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.44■□□□□ 0.86
BMP3P12645 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BMP3P12645 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BMP3P12645 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms