Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 KRT18P48-201ENST00000434763 852 ntBASIC17.36■□□□□ 0.37
PCNAP12004 KRT18P38-201ENST00000449496 1282 ntBASIC17.36■□□□□ 0.37
PCNAP12004 HOMER2P1-201ENST00000455653 964 ntBASIC17.36■□□□□ 0.37
PCNAP12004 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.36■□□□□ 0.37
PCNAP12004 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
PCNAP12004 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.36■□□□□ 0.37
PCNAP12004 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.36■□□□□ 0.37
PCNAP12004 RN7SL850P-201ENST00000579959 291 ntBASIC17.36■□□□□ 0.37
PCNAP12004 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.36■□□□□ 0.37
PCNAP12004 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.36■□□□□ 0.37
PCNAP12004 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PCNAP12004 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PCNAP12004 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.36■□□□□ 0.37
PCNAP12004 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCNAP12004 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCNAP12004 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.36■□□□□ 0.37
PCNAP12004 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCNAP12004 PRORSD1P-202ENST00000563365 2154 ntBASIC17.36■□□□□ 0.37
PCNAP12004 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCNAP12004 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCNAP12004 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
PCNAP12004 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.35■□□□□ 0.37
PCNAP12004 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 AC012317.2-201ENST00000623305 2251 ntBASIC17.35■□□□□ 0.37
PCNAP12004 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.35■□□□□ 0.37
PCNAP12004 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.35■□□□□ 0.37
PCNAP12004 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.35■□□□□ 0.37
PCNAP12004 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCNAP12004 AC112907.2-201ENST00000448639 330 ntBASIC17.35■□□□□ 0.37
PCNAP12004 AC104076.2-201ENST00000448912 469 ntBASIC17.35■□□□□ 0.37
PCNAP12004 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.35■□□□□ 0.37
PCNAP12004 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.35■□□□□ 0.37
PCNAP12004 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.35■□□□□ 0.37
PCNAP12004 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
PCNAP12004 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCNAP12004 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCNAP12004 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.35■□□□□ 0.37
PCNAP12004 LINC00167-201ENST00000530583 1419 ntBASIC17.35■□□□□ 0.37
PCNAP12004 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.35■□□□□ 0.37
PCNAP12004 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCNAP12004 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCNAP12004 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCNAP12004 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.35■□□□□ 0.37
PCNAP12004 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCNAP12004 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.35■□□□□ 0.37
PCNAP12004 AC080080.1-201ENST00000625121 2420 ntBASIC17.35■□□□□ 0.37
PCNAP12004 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNAP12004 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.34■□□□□ 0.37
PCNAP12004 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNAP12004 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNAP12004 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCNAP12004 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNAP12004 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNAP12004 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNAP12004 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNAP12004 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNAP12004 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNAP12004 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCNAP12004 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNAP12004 RCN1P1-201ENST00000400413 996 ntBASIC17.34■□□□□ 0.37
PCNAP12004 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PCNAP12004 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCNAP12004 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms