Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.91□□□□□ -0.02
ABCA1O95477 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.91□□□□□ -0.02
ABCA1O95477 OR7E14P-202ENST00000530490 1290 ntBASIC14.91□□□□□ -0.02
ABCA1O95477 AL139288.1-201ENST00000623748 933 ntBASIC14.91□□□□□ -0.02
ABCA1O95477 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA1O95477 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCA1O95477 AL356309.3-201ENST00000624132 1934 ntBASIC14.91□□□□□ -0.02
ABCA1O95477 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA1O95477 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA1O95477 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.91□□□□□ -0.02
ABCA1O95477 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA1O95477 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCA1O95477 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA1O95477 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA1O95477 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA1O95477 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
ABCA1O95477 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.91□□□□□ -0.02
ABCA1O95477 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA1O95477 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.91□□□□□ -0.02
ABCA1O95477 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA1O95477 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.91□□□□□ -0.02
ABCA1O95477 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCA1O95477 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCA1O95477 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ABCA1O95477 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCA1O95477 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCA1O95477 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.91□□□□□ -0.02
ABCA1O95477 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ABCA1O95477 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ABCA1O95477 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.9□□□□□ -0.02
ABCA1O95477 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ABCA1O95477 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.9□□□□□ -0.02
ABCA1O95477 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.9□□□□□ -0.02
ABCA1O95477 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.9□□□□□ -0.02
ABCA1O95477 AC002347.1-201ENST00000569543 541 ntBASIC14.9□□□□□ -0.02
ABCA1O95477 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.9□□□□□ -0.02
ABCA1O95477 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.9□□□□□ -0.02
ABCA1O95477 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
ABCA1O95477 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
ABCA1O95477 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
ABCA1O95477 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
ABCA1O95477 AL499627.1-201ENST00000569373 2188 ntBASIC14.9□□□□□ -0.02
ABCA1O95477 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.9□□□□□ -0.02
ABCA1O95477 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.9□□□□□ -0.02
ABCA1O95477 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
ABCA1O95477 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ABCA1O95477 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 Z83851.2-201ENST00000609564 659 ntBASIC14.9□□□□□ -0.02
ABCA1O95477 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.9□□□□□ -0.02
ABCA1O95477 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ABCA1O95477 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
ABCA1O95477 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ABCA1O95477 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.89□□□□□ -0.03
ABCA1O95477 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.89□□□□□ -0.03
ABCA1O95477 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.89□□□□□ -0.03
ABCA1O95477 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.89□□□□□ -0.03
ABCA1O95477 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.89□□□□□ -0.03
ABCA1O95477 GPX1P2-201ENST00000429271 606 ntBASIC14.89□□□□□ -0.03
ABCA1O95477 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.89□□□□□ -0.03
ABCA1O95477 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.89□□□□□ -0.03
ABCA1O95477 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.89□□□□□ -0.03
ABCA1O95477 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ABCA1O95477 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.89□□□□□ -0.03
ABCA1O95477 PKD1P5-201ENST00000532415 10291 ntBASIC14.89□□□□□ -0.03
ABCA1O95477 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.89□□□□□ -0.03
ABCA1O95477 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ABCA1O95477 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 AC106820.2-201ENST00000563775 3264 ntBASIC14.89□□□□□ -0.03
ABCA1O95477 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ABCA1O95477 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.89□□□□□ -0.03
ABCA1O95477 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms