Protein–RNA interactions for Protein: O94911

ABCA8, ATP-binding cassette sub-family A member 8, humanhuman

Predictions only

Length 1,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8O94911 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA8O94911 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA8O94911 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA8O94911 PMS2P4-201ENST00000412466 1052 ntBASIC27.41■■□□□ 1.98
ABCA8O94911 AC087163.2-201ENST00000457299 853 ntBASIC27.41■■□□□ 1.98
ABCA8O94911 SLC25A6P2-201ENST00000497974 877 ntBASIC27.41■■□□□ 1.98
ABCA8O94911 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC27.41■■□□□ 1.98
ABCA8O94911 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC27.41■■□□□ 1.98
ABCA8O94911 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA8O94911 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA8O94911 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA8O94911 AC116562.4-201ENST00000641316 2276 ntBASIC27.41■■□□□ 1.98
ABCA8O94911 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC27.41■■□□□ 1.98
ABCA8O94911 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC27.41■■□□□ 1.98
ABCA8O94911 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA8O94911 GPS2P2-201ENST00000430745 888 ntBASIC27.4■■□□□ 1.98
ABCA8O94911 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
ABCA8O94911 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA8O94911 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA8O94911 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA8O94911 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA8O94911 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC27.4■■□□□ 1.98
ABCA8O94911 AL096828.2-201ENST00000567259 1965 ntBASIC27.39■■□□□ 1.98
ABCA8O94911 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA8O94911 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA8O94911 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA8O94911 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA8O94911 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC27.39■■□□□ 1.98
ABCA8O94911 AC067863.1-201ENST00000494933 530 ntBASIC27.39■■□□□ 1.98
ABCA8O94911 YTHDF3-AS1-201ENST00000603538 718 ntBASIC27.39■■□□□ 1.98
ABCA8O94911 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA8O94911 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA8O94911 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA8O94911 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA8O94911 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA8O94911 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
ABCA8O94911 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA8O94911 EFTUD1P1-204ENST00000560401 1798 ntBASIC27.39■■□□□ 1.97
ABCA8O94911 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
ABCA8O94911 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
ABCA8O94911 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC27.39■■□□□ 1.97
ABCA8O94911 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC27.39■■□□□ 1.97
ABCA8O94911 HLA-DRB6-201ENST00000411500 1235 ntBASIC27.39■■□□□ 1.97
ABCA8O94911 AC092474.2-201ENST00000424288 719 ntBASIC27.39■■□□□ 1.97
ABCA8O94911 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC27.39■■□□□ 1.97
ABCA8O94911 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC27.39■■□□□ 1.97
ABCA8O94911 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
ABCA8O94911 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
ABCA8O94911 AC069262.1-201ENST00000539058 672 ntBASIC27.39■■□□□ 1.97
ABCA8O94911 RBM7-207ENST00000544582 692 ntTSL 3 BASIC27.39■■□□□ 1.97
ABCA8O94911 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC27.39■■□□□ 1.97
ABCA8O94911 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA8O94911 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA8O94911 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC27.38■■□□□ 1.97
ABCA8O94911 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA8O94911 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA8O94911 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA8O94911 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA8O94911 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC27.38■■□□□ 1.97
ABCA8O94911 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC27.38■■□□□ 1.97
ABCA8O94911 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA8O94911 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC27.38■■□□□ 1.97
ABCA8O94911 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC27.38■■□□□ 1.97
ABCA8O94911 TIMM8BP1-201ENST00000452384 211 ntBASIC27.38■■□□□ 1.97
ABCA8O94911 AC093214.1-201ENST00000511688 1107 ntBASIC27.38■■□□□ 1.97
ABCA8O94911 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC27.38■■□□□ 1.97
ABCA8O94911 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC27.38■■□□□ 1.97
ABCA8O94911 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC27.38■■□□□ 1.97
ABCA8O94911 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC27.38■■□□□ 1.97
ABCA8O94911 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA8O94911 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC27.38■■□□□ 1.97
ABCA8O94911 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA8O94911 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA8O94911 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA8O94911 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA8O94911 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC27.37■■□□□ 1.97
ABCA8O94911 FAM185BP-201ENST00000443595 716 ntBASIC27.37■■□□□ 1.97
ABCA8O94911 TAF8-206ENST00000472818 719 ntTSL 2 BASIC27.37■■□□□ 1.97
ABCA8O94911 IGHV3-52-201ENST00000519770 353 ntBASIC27.37■■□□□ 1.97
ABCA8O94911 AC107918.2-201ENST00000530817 355 ntBASIC27.37■■□□□ 1.97
ABCA8O94911 AC087641.1-201ENST00000557561 1021 ntBASIC27.37■■□□□ 1.97
ABCA8O94911 DUT-210ENST00000559935 569 ntTSL 3 BASIC27.37■■□□□ 1.97
ABCA8O94911 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC27.37■■□□□ 1.97
ABCA8O94911 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC27.37■■□□□ 1.97
ABCA8O94911 AF228730.6-201ENST00000641497 218 ntBASIC27.37■■□□□ 1.97
ABCA8O94911 AC084121.3-201ENST00000641716 218 ntBASIC27.37■■□□□ 1.97
ABCA8O94911 AC105233.6-201ENST00000642093 218 ntBASIC27.37■■□□□ 1.97
ABCA8O94911 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC27.37■■□□□ 1.97
ABCA8O94911 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
ABCA8O94911 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
ABCA8O94911 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA8O94911 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ABCA8O94911 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ABCA8O94911 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ABCA8O94911 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC27.36■■□□□ 1.97
ABCA8O94911 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
ABCA8O94911 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ABCA8O94911 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC27.36■■□□□ 1.97
ABCA8O94911 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ABCA8O94911 AC140658.5-201ENST00000438532 169 ntBASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms