Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EIF3FO00303 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
EIF3FO00303 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EIF3FO00303 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.41■□□□□ 0.38
EIF3FO00303 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.4■□□□□ 0.38
EIF3FO00303 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
EIF3FO00303 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
EIF3FO00303 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
EIF3FO00303 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
EIF3FO00303 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.4■□□□□ 0.38
EIF3FO00303 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
EIF3FO00303 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.4■□□□□ 0.38
EIF3FO00303 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.4■□□□□ 0.38
EIF3FO00303 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.4■□□□□ 0.38
EIF3FO00303 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.4■□□□□ 0.38
EIF3FO00303 AC087388.1-201ENST00000571370 1112 ntBASIC17.4■□□□□ 0.38
EIF3FO00303 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.4■□□□□ 0.38
EIF3FO00303 AC011840.4-201ENST00000578471 627 ntBASIC17.4■□□□□ 0.38
EIF3FO00303 AC124864.1-201ENST00000623408 392 ntBASIC17.4■□□□□ 0.38
EIF3FO00303 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
EIF3FO00303 REXO1L11P-201ENST00000620964 1927 ntBASIC17.4■□□□□ 0.38
EIF3FO00303 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.4■□□□□ 0.38
EIF3FO00303 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
EIF3FO00303 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.4■□□□□ 0.38
EIF3FO00303 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EIF3FO00303 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.39■□□□□ 0.38
EIF3FO00303 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.39■□□□□ 0.38
EIF3FO00303 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.39■□□□□ 0.37
EIF3FO00303 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
EIF3FO00303 MST1L-201ENST00000442552 2185 ntBASIC17.39■□□□□ 0.37
EIF3FO00303 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
EIF3FO00303 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
EIF3FO00303 COX5BP2-201ENST00000392354 334 ntBASIC17.39■□□□□ 0.37
EIF3FO00303 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.39■□□□□ 0.37
EIF3FO00303 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.39■□□□□ 0.37
EIF3FO00303 VENTXP7-201ENST00000475503 772 ntBASIC17.39■□□□□ 0.37
EIF3FO00303 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.39■□□□□ 0.37
EIF3FO00303 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
EIF3FO00303 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
EIF3FO00303 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.39■□□□□ 0.37
EIF3FO00303 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.39■□□□□ 0.37
EIF3FO00303 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EIF3FO00303 AC125634.1-201ENST00000438758 1403 ntBASIC17.38■□□□□ 0.37
EIF3FO00303 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.38■□□□□ 0.37
EIF3FO00303 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EIF3FO00303 PCED1CP-201ENST00000419887 785 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms