Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX39AO00148 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
DDX39AO00148 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
DDX39AO00148 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX39AO00148 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX39AO00148 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
DDX39AO00148 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX39AO00148 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
DDX39AO00148 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
DDX39AO00148 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20■□□□□ 0.79
DDX39AO00148 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20■□□□□ 0.79
DDX39AO00148 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
DDX39AO00148 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20■□□□□ 0.79
DDX39AO00148 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
DDX39AO00148 FAM220CP-201ENST00000395253 831 ntBASIC20■□□□□ 0.79
DDX39AO00148 AC096633.1-201ENST00000422446 749 ntBASIC20■□□□□ 0.79
DDX39AO00148 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20■□□□□ 0.79
DDX39AO00148 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20■□□□□ 0.79
DDX39AO00148 AP002469.2-201ENST00000531724 424 ntBASIC20■□□□□ 0.79
DDX39AO00148 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
DDX39AO00148 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20■□□□□ 0.79
DDX39AO00148 MTDHP3-201ENST00000594186 672 ntBASIC20■□□□□ 0.79
DDX39AO00148 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
DDX39AO00148 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20■□□□□ 0.79
DDX39AO00148 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20■□□□□ 0.79
DDX39AO00148 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20■□□□□ 0.79
DDX39AO00148 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20■□□□□ 0.79
DDX39AO00148 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
DDX39AO00148 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
DDX39AO00148 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 AC138028.4-201ENST00000564984 1845 ntBASIC19.99■□□□□ 0.79
DDX39AO00148 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
DDX39AO00148 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.99■□□□□ 0.79
DDX39AO00148 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX39AO00148 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
DDX39AO00148 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX39AO00148 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.99■□□□□ 0.79
DDX39AO00148 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
DDX39AO00148 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 SIRPAP1-201ENST00000448467 1770 ntBASIC19.99■□□□□ 0.79
DDX39AO00148 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.99■□□□□ 0.79
DDX39AO00148 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.99■□□□□ 0.79
DDX39AO00148 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.99■□□□□ 0.79
DDX39AO00148 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
DDX39AO00148 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
DDX39AO00148 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
DDX39AO00148 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX39AO00148 AC135050.7-201ENST00000624508 2218 ntBASIC19.99■□□□□ 0.79
DDX39AO00148 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 AC097374.2-201ENST00000618617 1306 ntBASIC19.99■□□□□ 0.79
DDX39AO00148 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX39AO00148 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX39AO00148 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
DDX39AO00148 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX39AO00148 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.98■□□□□ 0.79
DDX39AO00148 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
DDX39AO00148 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX39AO00148 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms