Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AL359075.1-203ENST00000462729 1002 ntBASIC14.35□□□□□ -0.11
SRRM4A7MD48 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.35□□□□□ -0.11
SRRM4A7MD48 AP003733.1-201ENST00000491725 852 ntBASIC14.35□□□□□ -0.11
SRRM4A7MD48 ZNF444P1-201ENST00000559497 298 ntBASIC14.35□□□□□ -0.11
SRRM4A7MD48 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRRM4A7MD48 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.35□□□□□ -0.11
SRRM4A7MD48 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.35□□□□□ -0.11
SRRM4A7MD48 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.35□□□□□ -0.11
SRRM4A7MD48 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.35□□□□□ -0.11
SRRM4A7MD48 AC116407.2-201ENST00000613639 860 ntBASIC14.35□□□□□ -0.11
SRRM4A7MD48 AC009154.2-201ENST00000621177 724 ntBASIC14.35□□□□□ -0.11
SRRM4A7MD48 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.35□□□□□ -0.11
SRRM4A7MD48 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRRM4A7MD48 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.35□□□□□ -0.11
SRRM4A7MD48 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRRM4A7MD48 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SRRM4A7MD48 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SRRM4A7MD48 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SRRM4A7MD48 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRRM4A7MD48 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRRM4A7MD48 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 AL353692.3-201ENST00000407031 1396 ntBASIC14.34□□□□□ -0.11
SRRM4A7MD48 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRRM4A7MD48 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SRRM4A7MD48 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SRRM4A7MD48 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
SRRM4A7MD48 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.33□□□□□ -0.11
SRRM4A7MD48 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRRM4A7MD48 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRRM4A7MD48 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRRM4A7MD48 SIRPAP1-201ENST00000448467 1770 ntBASIC14.33□□□□□ -0.12
SRRM4A7MD48 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRRM4A7MD48 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRRM4A7MD48 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRRM4A7MD48 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRRM4A7MD48 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SRRM4A7MD48 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 AC112698.1-201ENST00000510299 916 ntBASIC14.33□□□□□ -0.12
SRRM4A7MD48 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.33□□□□□ -0.12
SRRM4A7MD48 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.32□□□□□ -0.12
SRRM4A7MD48 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRRM4A7MD48 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms