Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC28.38■■■□□ 2.13
TRIM17Q9Y577 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TRIM17Q9Y577 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
TRIM17Q9Y577 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.38■■■□□ 2.13
TRIM17Q9Y577 KRT125P-201ENST00000546827 989 ntBASIC28.38■■■□□ 2.13
TRIM17Q9Y577 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.38■■■□□ 2.13
TRIM17Q9Y577 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.37■■■□□ 2.13
TRIM17Q9Y577 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRIM17Q9Y577 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TRIM17Q9Y577 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
TRIM17Q9Y577 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC28.36■■■□□ 2.13
TRIM17Q9Y577 MIR4787-201ENST00000607364 84 ntBASIC28.36■■■□□ 2.13
TRIM17Q9Y577 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.36■■■□□ 2.13
TRIM17Q9Y577 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
TRIM17Q9Y577 NALT1-201ENST00000429224 738 ntTSL 5 BASIC28.35■■■□□ 2.13
TRIM17Q9Y577 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.35■■■□□ 2.13
TRIM17Q9Y577 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.35■■■□□ 2.13
TRIM17Q9Y577 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.34■■■□□ 2.13
TRIM17Q9Y577 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM17Q9Y577 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM17Q9Y577 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM17Q9Y577 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC28.34■■■□□ 2.13
TRIM17Q9Y577 LONRF2P2-201ENST00000439212 571 ntBASIC28.34■■■□□ 2.13
TRIM17Q9Y577 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.34■■■□□ 2.13
TRIM17Q9Y577 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM17Q9Y577 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM17Q9Y577 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM17Q9Y577 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
TRIM17Q9Y577 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.33■■■□□ 2.13
TRIM17Q9Y577 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM17Q9Y577 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM17Q9Y577 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.33■■■□□ 2.13
TRIM17Q9Y577 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TRIM17Q9Y577 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
TRIM17Q9Y577 KRT16P3-201ENST00000439127 1283 ntBASIC28.32■■■□□ 2.12
TRIM17Q9Y577 UNC93B8-201ENST00000511903 705 ntBASIC28.32■■■□□ 2.12
TRIM17Q9Y577 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.32■■■□□ 2.12
TRIM17Q9Y577 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TRIM17Q9Y577 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
TRIM17Q9Y577 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM17Q9Y577 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM17Q9Y577 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
TRIM17Q9Y577 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TRIM17Q9Y577 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.29■■■□□ 2.12
TRIM17Q9Y577 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.29■■■□□ 2.12
TRIM17Q9Y577 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.29■■■□□ 2.12
TRIM17Q9Y577 BX664725.1-201ENST00000438252 379 ntBASIC28.28■■■□□ 2.12
TRIM17Q9Y577 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
TRIM17Q9Y577 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.28■■■□□ 2.12
TRIM17Q9Y577 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRIM17Q9Y577 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC28.28■■■□□ 2.12
TRIM17Q9Y577 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRIM17Q9Y577 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRIM17Q9Y577 AC100797.4-201ENST00000631653 1827 ntBASIC28.27■■■□□ 2.12
TRIM17Q9Y577 AC087393.1-201ENST00000582896 145 ntBASIC28.27■■■□□ 2.12
TRIM17Q9Y577 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TRIM17Q9Y577 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRIM17Q9Y577 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRIM17Q9Y577 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
TRIM17Q9Y577 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TRIM17Q9Y577 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM17Q9Y577 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM17Q9Y577 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.24■■■□□ 2.11
TRIM17Q9Y577 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
TRIM17Q9Y577 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM17Q9Y577 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
TRIM17Q9Y577 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM17Q9Y577 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.22■■■□□ 2.11
TRIM17Q9Y577 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.22■■■□□ 2.11
TRIM17Q9Y577 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM17Q9Y577 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.21■■■□□ 2.11
TRIM17Q9Y577 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM17Q9Y577 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM17Q9Y577 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM17Q9Y577 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.2■■■□□ 2.11
TRIM17Q9Y577 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC28.2■■■□□ 2.1
TRIM17Q9Y577 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28.2■■■□□ 2.1
TRIM17Q9Y577 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM17Q9Y577 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.19■■■□□ 2.1
TRIM17Q9Y577 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
TRIM17Q9Y577 AP004833.2-201ENST00000532228 1454 ntBASIC28.19■■■□□ 2.1
TRIM17Q9Y577 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM17Q9Y577 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM17Q9Y577 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM17Q9Y577 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.16■■■□□ 2.1
TRIM17Q9Y577 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.16■■■□□ 2.1
TRIM17Q9Y577 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC28.16■■■□□ 2.1
TRIM17Q9Y577 TSPY9P-201ENST00000440215 945 ntBASIC28.16■■■□□ 2.1
TRIM17Q9Y577 TSPY11P-201ENST00000442607 1045 ntBASIC28.16■■■□□ 2.1
TRIM17Q9Y577 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.16■■■□□ 2.1
TRIM17Q9Y577 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM17Q9Y577 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM17Q9Y577 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM17Q9Y577 AC131281.2-201ENST00000520478 145 ntBASIC28.15■■■□□ 2.1
TRIM17Q9Y577 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
TRIM17Q9Y577 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM17Q9Y577 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM17Q9Y577 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM17Q9Y577 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM17Q9Y577 RPS2P7-201ENST00000447334 885 ntBASIC28.14■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms