Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COMMD9Q9P000 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD9Q9P000 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD9Q9P000 AC100797.4-201ENST00000631653 1827 ntBASIC20.66■□□□□ 0.9
COMMD9Q9P000 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD9Q9P000 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.65■□□□□ 0.9
COMMD9Q9P000 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD9Q9P000 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.65■□□□□ 0.9
COMMD9Q9P000 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
COMMD9Q9P000 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COMMD9Q9P000 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD9Q9P000 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
COMMD9Q9P000 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD9Q9P000 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.63■□□□□ 0.89
COMMD9Q9P000 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD9Q9P000 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD9Q9P000 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD9Q9P000 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
COMMD9Q9P000 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD9Q9P000 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.63■□□□□ 0.89
COMMD9Q9P000 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD9Q9P000 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
COMMD9Q9P000 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD9Q9P000 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD9Q9P000 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COMMD9Q9P000 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD9Q9P000 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.62■□□□□ 0.89
COMMD9Q9P000 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COMMD9Q9P000 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD9Q9P000 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.61■□□□□ 0.89
COMMD9Q9P000 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD9Q9P000 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD9Q9P000 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
COMMD9Q9P000 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
COMMD9Q9P000 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD9Q9P000 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD9Q9P000 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.6■□□□□ 0.89
COMMD9Q9P000 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.6■□□□□ 0.89
COMMD9Q9P000 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.6■□□□□ 0.89
COMMD9Q9P000 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD9Q9P000 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.6■□□□□ 0.89
COMMD9Q9P000 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD9Q9P000 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD9Q9P000 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COMMD9Q9P000 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
COMMD9Q9P000 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.59■□□□□ 0.89
COMMD9Q9P000 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD9Q9P000 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.59■□□□□ 0.89
COMMD9Q9P000 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD9Q9P000 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
COMMD9Q9P000 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
COMMD9Q9P000 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD9Q9P000 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.58■□□□□ 0.89
COMMD9Q9P000 AC005559.1-201ENST00000589661 871 ntBASIC20.58■□□□□ 0.89
COMMD9Q9P000 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.58■□□□□ 0.88
COMMD9Q9P000 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COMMD9Q9P000 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
COMMD9Q9P000 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD9Q9P000 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD9Q9P000 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD9Q9P000 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD9Q9P000 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.57■□□□□ 0.88
COMMD9Q9P000 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD9Q9P000 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.57■□□□□ 0.88
COMMD9Q9P000 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD9Q9P000 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD9Q9P000 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD9Q9P000 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD9Q9P000 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.56■□□□□ 0.88
COMMD9Q9P000 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.56■□□□□ 0.88
COMMD9Q9P000 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD9Q9P000 ERN1-208ENST00000606895 2068 ntBASIC20.55■□□□□ 0.88
COMMD9Q9P000 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD9Q9P000 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD9Q9P000 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD9Q9P000 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD9Q9P000 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD9Q9P000 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COMMD9Q9P000 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.54■□□□□ 0.88
COMMD9Q9P000 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD9Q9P000 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD9Q9P000 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
COMMD9Q9P000 AC108673.1-201ENST00000510422 1159 ntBASIC20.54■□□□□ 0.88
COMMD9Q9P000 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD9Q9P000 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD9Q9P000 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD9Q9P000 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.53■□□□□ 0.88
COMMD9Q9P000 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD9Q9P000 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD9Q9P000 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.53■□□□□ 0.88
COMMD9Q9P000 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.53■□□□□ 0.88
COMMD9Q9P000 AC135983.2-203ENST00000454486 1613 ntBASIC20.53■□□□□ 0.88
COMMD9Q9P000 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.52■□□□□ 0.88
COMMD9Q9P000 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.52■□□□□ 0.88
COMMD9Q9P000 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COMMD9Q9P000 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COMMD9Q9P000 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.52■□□□□ 0.87
COMMD9Q9P000 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
COMMD9Q9P000 AC018358.1-201ENST00000631079 1402 ntBASIC20.52■□□□□ 0.87
COMMD9Q9P000 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 316.4 ms