Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GAR1Q9NY12 AC018358.1-201ENST00000631079 1402 ntBASIC19.65■□□□□ 0.74
GAR1Q9NY12 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.65■□□□□ 0.74
GAR1Q9NY12 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GAR1Q9NY12 LINC00543-201ENST00000567234 1845 ntBASIC19.65■□□□□ 0.74
GAR1Q9NY12 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.64■□□□□ 0.74
GAR1Q9NY12 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GAR1Q9NY12 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GAR1Q9NY12 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GAR1Q9NY12 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.64■□□□□ 0.73
GAR1Q9NY12 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.64■□□□□ 0.73
GAR1Q9NY12 AC021231.2-201ENST00000594613 730 ntBASIC19.64■□□□□ 0.73
GAR1Q9NY12 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GAR1Q9NY12 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
GAR1Q9NY12 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GAR1Q9NY12 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GAR1Q9NY12 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GAR1Q9NY12 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.63■□□□□ 0.73
GAR1Q9NY12 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GAR1Q9NY12 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.63■□□□□ 0.73
GAR1Q9NY12 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.63■□□□□ 0.73
GAR1Q9NY12 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.63■□□□□ 0.73
GAR1Q9NY12 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GAR1Q9NY12 AC133561.1-201ENST00000568600 2415 ntBASIC19.63■□□□□ 0.73
GAR1Q9NY12 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.63■□□□□ 0.73
GAR1Q9NY12 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GAR1Q9NY12 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.63■□□□□ 0.73
GAR1Q9NY12 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
GAR1Q9NY12 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
GAR1Q9NY12 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GAR1Q9NY12 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.62■□□□□ 0.73
GAR1Q9NY12 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.61■□□□□ 0.73
GAR1Q9NY12 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GAR1Q9NY12 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GAR1Q9NY12 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GAR1Q9NY12 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GAR1Q9NY12 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
GAR1Q9NY12 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GAR1Q9NY12 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.61■□□□□ 0.73
GAR1Q9NY12 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GAR1Q9NY12 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GAR1Q9NY12 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
GAR1Q9NY12 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
GAR1Q9NY12 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GAR1Q9NY12 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
GAR1Q9NY12 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
GAR1Q9NY12 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.6■□□□□ 0.73
GAR1Q9NY12 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.6■□□□□ 0.73
GAR1Q9NY12 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GAR1Q9NY12 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GAR1Q9NY12 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GAR1Q9NY12 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.59■□□□□ 0.73
GAR1Q9NY12 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GAR1Q9NY12 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GAR1Q9NY12 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.59■□□□□ 0.73
GAR1Q9NY12 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GAR1Q9NY12 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GAR1Q9NY12 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GAR1Q9NY12 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GAR1Q9NY12 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.58■□□□□ 0.73
GAR1Q9NY12 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GAR1Q9NY12 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GAR1Q9NY12 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GAR1Q9NY12 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GAR1Q9NY12 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GAR1Q9NY12 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GAR1Q9NY12 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GAR1Q9NY12 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
GAR1Q9NY12 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.57■□□□□ 0.72
GAR1Q9NY12 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GAR1Q9NY12 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GAR1Q9NY12 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.57■□□□□ 0.72
GAR1Q9NY12 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.56■□□□□ 0.72
GAR1Q9NY12 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GAR1Q9NY12 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GAR1Q9NY12 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.56■□□□□ 0.72
GAR1Q9NY12 AC110285.7-201ENST00000624417 1536 ntBASIC19.56■□□□□ 0.72
GAR1Q9NY12 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GAR1Q9NY12 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GAR1Q9NY12 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GAR1Q9NY12 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GAR1Q9NY12 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.55■□□□□ 0.72
GAR1Q9NY12 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GAR1Q9NY12 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GAR1Q9NY12 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAR1Q9NY12 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAR1Q9NY12 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.54■□□□□ 0.72
GAR1Q9NY12 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAR1Q9NY12 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.54■□□□□ 0.72
GAR1Q9NY12 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAR1Q9NY12 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
GAR1Q9NY12 AC012676.1-201ENST00000574705 1949 ntBASIC19.53■□□□□ 0.72
GAR1Q9NY12 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAR1Q9NY12 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAR1Q9NY12 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAR1Q9NY12 LINC01971-201ENST00000617888 1048 ntBASIC19.53■□□□□ 0.72
GAR1Q9NY12 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.53■□□□□ 0.72
GAR1Q9NY12 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GAR1Q9NY12 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.52■□□□□ 0.72
GAR1Q9NY12 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms