Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Q9N2K0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Q9N2K0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.48■□□□□ 0.87
Q9N2K0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Q9N2K0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q9N2K0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q9N2K0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Q9N2K0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Q9N2K0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q9N2K0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Q9N2K0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.47■□□□□ 0.87
Q9N2K0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.47■□□□□ 0.87
Q9N2K0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Q9N2K0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.46■□□□□ 0.87
Q9N2K0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q9N2K0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q9N2K0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Q9N2K0 LINC01971-201ENST00000617888 1048 ntBASIC20.45■□□□□ 0.86
Q9N2K0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q9N2K0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q9N2K0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Q9N2K0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.44■□□□□ 0.86
Q9N2K0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q9N2K0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Q9N2K0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Q9N2K0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q9N2K0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Q9N2K0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q9N2K0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q9N2K0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.42■□□□□ 0.86
Q9N2K0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.42■□□□□ 0.86
Q9N2K0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.42■□□□□ 0.86
Q9N2K0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.42■□□□□ 0.86
Q9N2K0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q9N2K0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Q9N2K0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q9N2K0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Q9N2K0 AC010501.1-201ENST00000606270 1962 ntBASIC20.41■□□□□ 0.86
Q9N2K0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q9N2K0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Q9N2K0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Q9N2K0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.41■□□□□ 0.86
Q9N2K0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Q9N2K0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q9N2K0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q9N2K0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Q9N2K0 DUX4L13-201ENST00000554103 1267 ntBASIC20.4■□□□□ 0.86
Q9N2K0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Q9N2K0 DUX4L15-201ENST00000611059 1267 ntBASIC20.4■□□□□ 0.86
Q9N2K0 DUX4L23-201ENST00000615195 1269 ntBASIC20.4■□□□□ 0.86
Q9N2K0 DUX4L24-201ENST00000617576 1269 ntBASIC20.4■□□□□ 0.86
Q9N2K0 DUX4L22-201ENST00000618238 1269 ntBASIC20.4■□□□□ 0.86
Q9N2K0 DUX4L20-201ENST00000619712 1269 ntBASIC20.4■□□□□ 0.86
Q9N2K0 DUX4L21-201ENST00000622058 1269 ntBASIC20.4■□□□□ 0.86
Q9N2K0 DUX4L10-201ENST00000622460 1267 ntBASIC20.4■□□□□ 0.86
Q9N2K0 DUX4L25-201ENST00000624915 1269 ntBASIC20.4■□□□□ 0.86
Q9N2K0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Q9N2K0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Q9N2K0 ERN1-208ENST00000606895 2068 ntBASIC20.39■□□□□ 0.86
Q9N2K0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Q9N2K0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.39■□□□□ 0.85
Q9N2K0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.39■□□□□ 0.85
Q9N2K0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.39■□□□□ 0.85
Q9N2K0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Q9N2K0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q9N2K0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Q9N2K0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Q9N2K0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Q9N2K0 AC008813.1-201ENST00000536597 885 ntBASIC20.38■□□□□ 0.85
Q9N2K0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Q9N2K0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Q9N2K0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
Q9N2K0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Q9N2K0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q9N2K0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Q9N2K0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Q9N2K0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.37■□□□□ 0.85
Q9N2K0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Q9N2K0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q9N2K0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.36■□□□□ 0.85
Q9N2K0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Q9N2K0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Q9N2K0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9N2K0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.36■□□□□ 0.85
Q9N2K0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9N2K0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Q9N2K0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.36■□□□□ 0.85
Q9N2K0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9N2K0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Q9N2K0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q9N2K0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q9N2K0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Q9N2K0 RPS2P35-201ENST00000443417 897 ntBASIC20.35■□□□□ 0.85
Q9N2K0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.35■□□□□ 0.85
Q9N2K0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.35■□□□□ 0.85
Q9N2K0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q9N2K0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q9N2K0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q9N2K0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q9N2K0 MIR219A2-201ENST00000608502 1504 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms