Protein–RNA interactions for Protein: Q9HBM1

SPC25, Kinetochore protein Spc25, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25Q9HBM1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SPC25Q9HBM1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SPC25Q9HBM1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
SPC25Q9HBM1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.68■■■□□ 2.02
SPC25Q9HBM1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.68■■■□□ 2.02
SPC25Q9HBM1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SPC25Q9HBM1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
SPC25Q9HBM1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
SPC25Q9HBM1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
SPC25Q9HBM1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SPC25Q9HBM1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC27.65■■■□□ 2.02
SPC25Q9HBM1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SPC25Q9HBM1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
SPC25Q9HBM1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.64■■■□□ 2.02
SPC25Q9HBM1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC27.64■■■□□ 2.02
SPC25Q9HBM1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SPC25Q9HBM1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SPC25Q9HBM1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
SPC25Q9HBM1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
SPC25Q9HBM1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SPC25Q9HBM1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.63■■■□□ 2.01
SPC25Q9HBM1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.63■■■□□ 2.01
SPC25Q9HBM1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SPC25Q9HBM1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SPC25Q9HBM1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SPC25Q9HBM1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
SPC25Q9HBM1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SPC25Q9HBM1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SPC25Q9HBM1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SPC25Q9HBM1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.61■■■□□ 2.01
SPC25Q9HBM1 AL592295.1-201ENST00000400984 884 ntBASIC27.61■■■□□ 2.01
SPC25Q9HBM1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
SPC25Q9HBM1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.61■■■□□ 2.01
SPC25Q9HBM1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SPC25Q9HBM1 WHAMMP3-201ENST00000611636 1609 ntBASIC27.6■■■□□ 2.01
SPC25Q9HBM1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.6■■■□□ 2.01
SPC25Q9HBM1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.6■■■□□ 2.01
SPC25Q9HBM1 AL031848.2-201ENST00000607670 837 ntBASIC27.6■■■□□ 2.01
SPC25Q9HBM1 AC131212.1-201ENST00000613771 668 ntBASIC27.6■■■□□ 2.01
SPC25Q9HBM1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.59■■■□□ 2.01
SPC25Q9HBM1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
SPC25Q9HBM1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
SPC25Q9HBM1 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.59■■■□□ 2.01
SPC25Q9HBM1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SPC25Q9HBM1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
SPC25Q9HBM1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.59■■■□□ 2.01
SPC25Q9HBM1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
SPC25Q9HBM1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SPC25Q9HBM1 GUSBP5-201ENST00000418136 578 ntBASIC27.58■■■□□ 2.01
SPC25Q9HBM1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SPC25Q9HBM1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC27.58■■■□□ 2.01
SPC25Q9HBM1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.58■■■□□ 2.01
SPC25Q9HBM1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.57■■■□□ 2
SPC25Q9HBM1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.57■■■□□ 2
SPC25Q9HBM1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
SPC25Q9HBM1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SPC25Q9HBM1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.57■■■□□ 2
SPC25Q9HBM1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.57■■■□□ 2
SPC25Q9HBM1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
SPC25Q9HBM1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.57■■■□□ 2
SPC25Q9HBM1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.57■■■□□ 2
SPC25Q9HBM1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.56■■■□□ 2
SPC25Q9HBM1 AC103724.3-201ENST00000564481 992 ntBASIC27.56■■■□□ 2
SPC25Q9HBM1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.56■■■□□ 2
SPC25Q9HBM1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
SPC25Q9HBM1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SPC25Q9HBM1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
SPC25Q9HBM1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
SPC25Q9HBM1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SPC25Q9HBM1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.55■■■□□ 2
SPC25Q9HBM1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.54■■■□□ 2
SPC25Q9HBM1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.54■■■□□ 2
SPC25Q9HBM1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.54■■■□□ 2
SPC25Q9HBM1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.54■■■□□ 2
SPC25Q9HBM1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.54■■■□□ 2
SPC25Q9HBM1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.54■■■□□ 2
SPC25Q9HBM1 AC019171.1-201ENST00000601251 1056 ntBASIC27.54■■■□□ 2
SPC25Q9HBM1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.53■■■□□ 2
SPC25Q9HBM1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
SPC25Q9HBM1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
SPC25Q9HBM1 THA1P-201ENST00000590384 1145 ntBASIC27.53■■■□□ 2
SPC25Q9HBM1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.53■■■□□ 2
SPC25Q9HBM1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.52■■■□□ 2
SPC25Q9HBM1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
SPC25Q9HBM1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
SPC25Q9HBM1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
SPC25Q9HBM1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
SPC25Q9HBM1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
SPC25Q9HBM1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
SPC25Q9HBM1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
SPC25Q9HBM1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
SPC25Q9HBM1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SPC25Q9HBM1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
SPC25Q9HBM1 AC087393.1-201ENST00000582896 145 ntBASIC27.49■■□□□ 1.99
SPC25Q9HBM1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SPC25Q9HBM1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SPC25Q9HBM1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SPC25Q9HBM1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
SPC25Q9HBM1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SPC25Q9HBM1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms