Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
KDM4CQ9H3R0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.41■■□□□ 1.66
KDM4CQ9H3R0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
KDM4CQ9H3R0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
KDM4CQ9H3R0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
KDM4CQ9H3R0 MIR219A2-201ENST00000608502 1504 ntBASIC25.41■■□□□ 1.66
KDM4CQ9H3R0 AC091060.1-201ENST00000623524 1766 ntBASIC25.41■■□□□ 1.66
KDM4CQ9H3R0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
KDM4CQ9H3R0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
KDM4CQ9H3R0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
KDM4CQ9H3R0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
KDM4CQ9H3R0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.4■■□□□ 1.66
KDM4CQ9H3R0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
KDM4CQ9H3R0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
KDM4CQ9H3R0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
KDM4CQ9H3R0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
KDM4CQ9H3R0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
KDM4CQ9H3R0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
KDM4CQ9H3R0 AC020928.2-201ENST00000588717 2197 ntBASIC25.38■■□□□ 1.65
KDM4CQ9H3R0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
KDM4CQ9H3R0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.38■■□□□ 1.65
KDM4CQ9H3R0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KDM4CQ9H3R0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KDM4CQ9H3R0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KDM4CQ9H3R0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
KDM4CQ9H3R0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.37■■□□□ 1.65
KDM4CQ9H3R0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
KDM4CQ9H3R0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
KDM4CQ9H3R0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.36■■□□□ 1.65
KDM4CQ9H3R0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
KDM4CQ9H3R0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
KDM4CQ9H3R0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
KDM4CQ9H3R0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
KDM4CQ9H3R0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.36■■□□□ 1.65
KDM4CQ9H3R0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.36■■□□□ 1.65
KDM4CQ9H3R0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KDM4CQ9H3R0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
KDM4CQ9H3R0 AC093323.1-202ENST00000635031 2045 ntBASIC25.35■■□□□ 1.65
KDM4CQ9H3R0 AC060814.1-201ENST00000554326 538 ntBASIC25.34■■□□□ 1.65
KDM4CQ9H3R0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
KDM4CQ9H3R0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.34■■□□□ 1.65
KDM4CQ9H3R0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
KDM4CQ9H3R0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
KDM4CQ9H3R0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
KDM4CQ9H3R0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KDM4CQ9H3R0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KDM4CQ9H3R0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.31■■□□□ 1.64
KDM4CQ9H3R0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.31■■□□□ 1.64
KDM4CQ9H3R0 LINC01003-201ENST00000564834 1764 ntBASIC25.31■■□□□ 1.64
KDM4CQ9H3R0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
KDM4CQ9H3R0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
KDM4CQ9H3R0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
KDM4CQ9H3R0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.31■■□□□ 1.64
KDM4CQ9H3R0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.31■■□□□ 1.64
KDM4CQ9H3R0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
KDM4CQ9H3R0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
KDM4CQ9H3R0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
KDM4CQ9H3R0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
KDM4CQ9H3R0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
KDM4CQ9H3R0 AC126177.7-201ENST00000547904 679 ntBASIC25.3■■□□□ 1.64
KDM4CQ9H3R0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
KDM4CQ9H3R0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.3■■□□□ 1.64
KDM4CQ9H3R0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.3■■□□□ 1.64
KDM4CQ9H3R0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
KDM4CQ9H3R0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
KDM4CQ9H3R0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
KDM4CQ9H3R0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.29■■□□□ 1.64
KDM4CQ9H3R0 AC100797.4-201ENST00000631653 1827 ntBASIC25.28■■□□□ 1.64
KDM4CQ9H3R0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
KDM4CQ9H3R0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
KDM4CQ9H3R0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.28■■□□□ 1.64
KDM4CQ9H3R0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
KDM4CQ9H3R0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
KDM4CQ9H3R0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.28■■□□□ 1.64
KDM4CQ9H3R0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
KDM4CQ9H3R0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
KDM4CQ9H3R0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.27■■□□□ 1.64
KDM4CQ9H3R0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
KDM4CQ9H3R0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
KDM4CQ9H3R0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.26■■□□□ 1.63
KDM4CQ9H3R0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
KDM4CQ9H3R0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
KDM4CQ9H3R0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.26■■□□□ 1.63
KDM4CQ9H3R0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
KDM4CQ9H3R0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
KDM4CQ9H3R0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
KDM4CQ9H3R0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.26■■□□□ 1.63
KDM4CQ9H3R0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
KDM4CQ9H3R0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
KDM4CQ9H3R0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
KDM4CQ9H3R0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.25■■□□□ 1.63
KDM4CQ9H3R0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
KDM4CQ9H3R0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
KDM4CQ9H3R0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
KDM4CQ9H3R0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
KDM4CQ9H3R0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
KDM4CQ9H3R0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
KDM4CQ9H3R0 AC092296.2-201ENST00000589470 999 ntBASIC25.24■■□□□ 1.63
KDM4CQ9H3R0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.24■■□□□ 1.63
KDM4CQ9H3R0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms