Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.2■■■□□ 2.43
VPS33BQ9H267 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
VPS33BQ9H267 AL359504.2-201ENST00000605506 1601 ntBASIC30.2■■■□□ 2.43
VPS33BQ9H267 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
VPS33BQ9H267 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.42
VPS33BQ9H267 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
VPS33BQ9H267 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
VPS33BQ9H267 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.19■■■□□ 2.42
VPS33BQ9H267 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.19■■■□□ 2.42
VPS33BQ9H267 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
VPS33BQ9H267 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
VPS33BQ9H267 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
VPS33BQ9H267 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
VPS33BQ9H267 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.17■■■□□ 2.42
VPS33BQ9H267 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
VPS33BQ9H267 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
VPS33BQ9H267 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
VPS33BQ9H267 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.16■■■□□ 2.42
VPS33BQ9H267 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
VPS33BQ9H267 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC30.16■■■□□ 2.42
VPS33BQ9H267 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
VPS33BQ9H267 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
VPS33BQ9H267 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
VPS33BQ9H267 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
VPS33BQ9H267 AL356441.2-201ENST00000443009 864 ntBASIC30.15■■■□□ 2.42
VPS33BQ9H267 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
VPS33BQ9H267 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
VPS33BQ9H267 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.13■■■□□ 2.41
VPS33BQ9H267 ABCB10P3-201ENST00000561950 2166 ntBASIC30.13■■■□□ 2.41
VPS33BQ9H267 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.13■■■□□ 2.41
VPS33BQ9H267 AC087393.1-201ENST00000582896 145 ntBASIC30.13■■■□□ 2.41
VPS33BQ9H267 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
VPS33BQ9H267 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.12■■■□□ 2.41
VPS33BQ9H267 AL139393.2-201ENST00000608721 2025 ntBASIC30.12■■■□□ 2.41
VPS33BQ9H267 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.12■■■□□ 2.41
VPS33BQ9H267 Z92544.1-202ENST00000571933 1220 ntBASIC30.12■■■□□ 2.41
VPS33BQ9H267 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
VPS33BQ9H267 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
VPS33BQ9H267 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
VPS33BQ9H267 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.11■■■□□ 2.41
VPS33BQ9H267 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.11■■■□□ 2.41
VPS33BQ9H267 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.11■■■□□ 2.41
VPS33BQ9H267 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.1■■■□□ 2.41
VPS33BQ9H267 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
VPS33BQ9H267 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
VPS33BQ9H267 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
VPS33BQ9H267 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
VPS33BQ9H267 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
VPS33BQ9H267 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.08■■■□□ 2.41
VPS33BQ9H267 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
VPS33BQ9H267 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.08■■■□□ 2.41
VPS33BQ9H267 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
VPS33BQ9H267 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
VPS33BQ9H267 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
VPS33BQ9H267 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.07■■■□□ 2.4
VPS33BQ9H267 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.07■■■□□ 2.4
VPS33BQ9H267 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.07■■■□□ 2.4
VPS33BQ9H267 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
VPS33BQ9H267 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.07■■■□□ 2.4
VPS33BQ9H267 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
VPS33BQ9H267 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
VPS33BQ9H267 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
VPS33BQ9H267 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.06■■■□□ 2.4
VPS33BQ9H267 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
VPS33BQ9H267 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
VPS33BQ9H267 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.05■■■□□ 2.4
VPS33BQ9H267 AC239859.2-201ENST00000444165 318 ntBASIC30.05■■■□□ 2.4
VPS33BQ9H267 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.05■■■□□ 2.4
VPS33BQ9H267 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.05■■■□□ 2.4
VPS33BQ9H267 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
VPS33BQ9H267 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
VPS33BQ9H267 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
VPS33BQ9H267 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.04■■■□□ 2.4
VPS33BQ9H267 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.04■■■□□ 2.4
VPS33BQ9H267 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
VPS33BQ9H267 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
VPS33BQ9H267 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
VPS33BQ9H267 LONRF2P2-201ENST00000439212 571 ntBASIC30.03■■■□□ 2.4
VPS33BQ9H267 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.02■■■□□ 2.4
VPS33BQ9H267 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
VPS33BQ9H267 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.02■■■□□ 2.4
VPS33BQ9H267 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
VPS33BQ9H267 WHAMMP3-201ENST00000611636 1609 ntBASIC30.01■■■□□ 2.39
VPS33BQ9H267 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
VPS33BQ9H267 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
VPS33BQ9H267 RPS2P7-201ENST00000447334 885 ntBASIC30.01■■■□□ 2.39
VPS33BQ9H267 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
VPS33BQ9H267 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
VPS33BQ9H267 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.01■■■□□ 2.39
VPS33BQ9H267 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30■■■□□ 2.39
VPS33BQ9H267 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
VPS33BQ9H267 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30■■■□□ 2.39
VPS33BQ9H267 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
VPS33BQ9H267 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
VPS33BQ9H267 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
VPS33BQ9H267 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
VPS33BQ9H267 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC29.99■■■□□ 2.39
VPS33BQ9H267 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
VPS33BQ9H267 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.98■■■□□ 2.39
VPS33BQ9H267 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms