Protein–RNA interactions for Protein: Q9H0E9

BRD8, Bromodomain-containing protein 8, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8Q9H0E9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
BRD8Q9H0E9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.18■■□□□ 1.62
BRD8Q9H0E9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
BRD8Q9H0E9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
BRD8Q9H0E9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
BRD8Q9H0E9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
BRD8Q9H0E9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
BRD8Q9H0E9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
BRD8Q9H0E9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
BRD8Q9H0E9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
BRD8Q9H0E9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
BRD8Q9H0E9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
BRD8Q9H0E9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
BRD8Q9H0E9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
BRD8Q9H0E9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
BRD8Q9H0E9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
BRD8Q9H0E9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
BRD8Q9H0E9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
BRD8Q9H0E9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
BRD8Q9H0E9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.15■■□□□ 1.62
BRD8Q9H0E9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
BRD8Q9H0E9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.14■■□□□ 1.62
BRD8Q9H0E9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.13■■□□□ 1.61
BRD8Q9H0E9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.13■■□□□ 1.61
BRD8Q9H0E9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
BRD8Q9H0E9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
BRD8Q9H0E9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.13■■□□□ 1.61
BRD8Q9H0E9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
BRD8Q9H0E9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.12■■□□□ 1.61
BRD8Q9H0E9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
BRD8Q9H0E9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.11■■□□□ 1.61
BRD8Q9H0E9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
BRD8Q9H0E9 AC091060.1-201ENST00000623524 1766 ntBASIC25.1■■□□□ 1.61
BRD8Q9H0E9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
BRD8Q9H0E9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.1■■□□□ 1.61
BRD8Q9H0E9 AC135731.1-201ENST00000569415 2548 ntBASIC25.1■■□□□ 1.61
BRD8Q9H0E9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
BRD8Q9H0E9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
BRD8Q9H0E9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.1■■□□□ 1.61
BRD8Q9H0E9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
BRD8Q9H0E9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.1■■□□□ 1.61
BRD8Q9H0E9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
BRD8Q9H0E9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
BRD8Q9H0E9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
BRD8Q9H0E9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
BRD8Q9H0E9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
BRD8Q9H0E9 AL359504.2-201ENST00000605506 1601 ntBASIC25.08■■□□□ 1.61
BRD8Q9H0E9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.08■■□□□ 1.61
BRD8Q9H0E9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
BRD8Q9H0E9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
BRD8Q9H0E9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
BRD8Q9H0E9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
BRD8Q9H0E9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.07■■□□□ 1.6
BRD8Q9H0E9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.07■■□□□ 1.6
BRD8Q9H0E9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
BRD8Q9H0E9 AC145676.1-201ENST00000514988 2004 ntBASIC25.07■■□□□ 1.6
BRD8Q9H0E9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
BRD8Q9H0E9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
BRD8Q9H0E9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.06■■□□□ 1.6
BRD8Q9H0E9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
BRD8Q9H0E9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
BRD8Q9H0E9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.06■■□□□ 1.6
BRD8Q9H0E9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
BRD8Q9H0E9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
BRD8Q9H0E9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
BRD8Q9H0E9 AC092803.2-201ENST00000564287 1899 ntBASIC25.06■■□□□ 1.6
BRD8Q9H0E9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
BRD8Q9H0E9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.05■■□□□ 1.6
BRD8Q9H0E9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.05■■□□□ 1.6
BRD8Q9H0E9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
BRD8Q9H0E9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
BRD8Q9H0E9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
BRD8Q9H0E9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
BRD8Q9H0E9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
BRD8Q9H0E9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
BRD8Q9H0E9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
BRD8Q9H0E9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
BRD8Q9H0E9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
BRD8Q9H0E9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
BRD8Q9H0E9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
BRD8Q9H0E9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
BRD8Q9H0E9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
BRD8Q9H0E9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.03■■□□□ 1.6
BRD8Q9H0E9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.03■■□□□ 1.6
BRD8Q9H0E9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
BRD8Q9H0E9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.03■■□□□ 1.6
BRD8Q9H0E9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.03■■□□□ 1.6
BRD8Q9H0E9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
BRD8Q9H0E9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.03■■□□□ 1.6
BRD8Q9H0E9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
BRD8Q9H0E9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.02■■□□□ 1.6
BRD8Q9H0E9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
BRD8Q9H0E9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
BRD8Q9H0E9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.02■■□□□ 1.6
BRD8Q9H0E9 DUSP8P4-201ENST00000399538 1761 ntBASIC25.01■■□□□ 1.59
BRD8Q9H0E9 AC060814.1-201ENST00000554326 538 ntBASIC25.01■■□□□ 1.59
BRD8Q9H0E9 MIR4449-201ENST00000578365 66 ntBASIC25.01■■□□□ 1.59
BRD8Q9H0E9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.01■■□□□ 1.59
BRD8Q9H0E9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
BRD8Q9H0E9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms