Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTL8AQ9BWD3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTL8AQ9BWD3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL8AQ9BWD3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL8AQ9BWD3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL8AQ9BWD3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL8AQ9BWD3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.95■□□□□ 0.94
RTL8AQ9BWD3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL8AQ9BWD3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTL8AQ9BWD3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTL8AQ9BWD3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.94■□□□□ 0.94
RTL8AQ9BWD3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTL8AQ9BWD3 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.94■□□□□ 0.94
RTL8AQ9BWD3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTL8AQ9BWD3 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.94■□□□□ 0.94
RTL8AQ9BWD3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTL8AQ9BWD3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.94■□□□□ 0.94
RTL8AQ9BWD3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.93■□□□□ 0.94
RTL8AQ9BWD3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RTL8AQ9BWD3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL8AQ9BWD3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.92■□□□□ 0.94
RTL8AQ9BWD3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL8AQ9BWD3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL8AQ9BWD3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.92■□□□□ 0.94
RTL8AQ9BWD3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTL8AQ9BWD3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.91■□□□□ 0.94
RTL8AQ9BWD3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.91■□□□□ 0.94
RTL8AQ9BWD3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.9■□□□□ 0.94
RTL8AQ9BWD3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.9■□□□□ 0.94
RTL8AQ9BWD3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
RTL8AQ9BWD3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL8AQ9BWD3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.9■□□□□ 0.94
RTL8AQ9BWD3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
RTL8AQ9BWD3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTL8AQ9BWD3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.9■□□□□ 0.94
RTL8AQ9BWD3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL8AQ9BWD3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTL8AQ9BWD3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.9■□□□□ 0.94
RTL8AQ9BWD3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.9■□□□□ 0.94
RTL8AQ9BWD3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL8AQ9BWD3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RTL8AQ9BWD3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL8AQ9BWD3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RTL8AQ9BWD3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RTL8AQ9BWD3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL8AQ9BWD3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL8AQ9BWD3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.88■□□□□ 0.93
RTL8AQ9BWD3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL8AQ9BWD3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.88■□□□□ 0.93
RTL8AQ9BWD3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL8AQ9BWD3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL8AQ9BWD3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTL8AQ9BWD3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RTL8AQ9BWD3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.87■□□□□ 0.93
RTL8AQ9BWD3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.87■□□□□ 0.93
RTL8AQ9BWD3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RTL8AQ9BWD3 AL359504.2-201ENST00000605506 1601 ntBASIC20.86■□□□□ 0.93
RTL8AQ9BWD3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTL8AQ9BWD3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
RTL8AQ9BWD3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL8AQ9BWD3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTL8AQ9BWD3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL8AQ9BWD3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL8AQ9BWD3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
RTL8AQ9BWD3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL8AQ9BWD3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL8AQ9BWD3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RTL8AQ9BWD3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL8AQ9BWD3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTL8AQ9BWD3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL8AQ9BWD3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL8AQ9BWD3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RTL8AQ9BWD3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.83■□□□□ 0.93
RTL8AQ9BWD3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL8AQ9BWD3 MIR4449-201ENST00000578365 66 ntBASIC20.83■□□□□ 0.93
RTL8AQ9BWD3 AC091060.1-201ENST00000623524 1766 ntBASIC20.82■□□□□ 0.92
RTL8AQ9BWD3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL8AQ9BWD3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL8AQ9BWD3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL8AQ9BWD3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL8AQ9BWD3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL8AQ9BWD3 AC060814.1-201ENST00000554326 538 ntBASIC20.82■□□□□ 0.92
RTL8AQ9BWD3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.82■□□□□ 0.92
RTL8AQ9BWD3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL8AQ9BWD3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL8AQ9BWD3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL8AQ9BWD3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL8AQ9BWD3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTL8AQ9BWD3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.81■□□□□ 0.92
RTL8AQ9BWD3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.81■□□□□ 0.92
RTL8AQ9BWD3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL8AQ9BWD3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.81■□□□□ 0.92
RTL8AQ9BWD3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL8AQ9BWD3 AC092803.2-201ENST00000564287 1899 ntBASIC20.81■□□□□ 0.92
RTL8AQ9BWD3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL8AQ9BWD3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL8AQ9BWD3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTL8AQ9BWD3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTL8AQ9BWD3 AC145676.1-201ENST00000514988 2004 ntBASIC20.79■□□□□ 0.92
RTL8AQ9BWD3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms