Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CITED4Q96RK1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.71■□□□□ 0.91
CITED4Q96RK1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CITED4Q96RK1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CITED4Q96RK1 LINC01003-201ENST00000564834 1764 ntBASIC20.71■□□□□ 0.91
CITED4Q96RK1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CITED4Q96RK1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CITED4Q96RK1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CITED4Q96RK1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CITED4Q96RK1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CITED4Q96RK1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
CITED4Q96RK1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CITED4Q96RK1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CITED4Q96RK1 ERN1-208ENST00000606895 2068 ntBASIC20.7■□□□□ 0.9
CITED4Q96RK1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.7■□□□□ 0.9
CITED4Q96RK1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CITED4Q96RK1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CITED4Q96RK1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CITED4Q96RK1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CITED4Q96RK1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.69■□□□□ 0.9
CITED4Q96RK1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CITED4Q96RK1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.69■□□□□ 0.9
CITED4Q96RK1 AL024507.2-201ENST00000606070 2574 ntBASIC20.69■□□□□ 0.9
CITED4Q96RK1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CITED4Q96RK1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CITED4Q96RK1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CITED4Q96RK1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CITED4Q96RK1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.68■□□□□ 0.9
CITED4Q96RK1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CITED4Q96RK1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CITED4Q96RK1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CITED4Q96RK1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CITED4Q96RK1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CITED4Q96RK1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CITED4Q96RK1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
CITED4Q96RK1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.67■□□□□ 0.9
CITED4Q96RK1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CITED4Q96RK1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.67■□□□□ 0.9
CITED4Q96RK1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CITED4Q96RK1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CITED4Q96RK1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CITED4Q96RK1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CITED4Q96RK1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CITED4Q96RK1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.67■□□□□ 0.9
CITED4Q96RK1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CITED4Q96RK1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CITED4Q96RK1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CITED4Q96RK1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CITED4Q96RK1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CITED4Q96RK1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CITED4Q96RK1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CITED4Q96RK1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CITED4Q96RK1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CITED4Q96RK1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CITED4Q96RK1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.64■□□□□ 0.89
CITED4Q96RK1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.64■□□□□ 0.89
CITED4Q96RK1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CITED4Q96RK1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CITED4Q96RK1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CITED4Q96RK1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.63■□□□□ 0.89
CITED4Q96RK1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CITED4Q96RK1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CITED4Q96RK1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CITED4Q96RK1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.63■□□□□ 0.89
CITED4Q96RK1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CITED4Q96RK1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CITED4Q96RK1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CITED4Q96RK1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CITED4Q96RK1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CITED4Q96RK1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CITED4Q96RK1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.62■□□□□ 0.89
CITED4Q96RK1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CITED4Q96RK1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.62■□□□□ 0.89
CITED4Q96RK1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CITED4Q96RK1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.62■□□□□ 0.89
CITED4Q96RK1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CITED4Q96RK1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CITED4Q96RK1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CITED4Q96RK1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CITED4Q96RK1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.61■□□□□ 0.89
CITED4Q96RK1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CITED4Q96RK1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.61■□□□□ 0.89
CITED4Q96RK1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CITED4Q96RK1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.61■□□□□ 0.89
CITED4Q96RK1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.61■□□□□ 0.89
CITED4Q96RK1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CITED4Q96RK1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CITED4Q96RK1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CITED4Q96RK1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CITED4Q96RK1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CITED4Q96RK1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CITED4Q96RK1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CITED4Q96RK1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.58■□□□□ 0.89
CITED4Q96RK1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CITED4Q96RK1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CITED4Q96RK1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CITED4Q96RK1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CITED4Q96RK1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CITED4Q96RK1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CITED4Q96RK1 DUSP8P4-201ENST00000399538 1761 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms