Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
CALR3Q96L12 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
CALR3Q96L12 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CALR3Q96L12 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CALR3Q96L12 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.88■■□□□ 1.73
CALR3Q96L12 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CALR3Q96L12 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CALR3Q96L12 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CALR3Q96L12 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
CALR3Q96L12 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.86■■□□□ 1.73
CALR3Q96L12 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CALR3Q96L12 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CALR3Q96L12 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.86■■□□□ 1.73
CALR3Q96L12 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CALR3Q96L12 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.86■■□□□ 1.73
CALR3Q96L12 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.86■■□□□ 1.73
CALR3Q96L12 AC010501.1-201ENST00000606270 1962 ntBASIC25.86■■□□□ 1.73
CALR3Q96L12 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.85■■□□□ 1.73
CALR3Q96L12 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CALR3Q96L12 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CALR3Q96L12 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CALR3Q96L12 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CALR3Q96L12 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.85■■□□□ 1.73
CALR3Q96L12 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CALR3Q96L12 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CALR3Q96L12 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
CALR3Q96L12 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.84■■□□□ 1.73
CALR3Q96L12 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.84■■□□□ 1.73
CALR3Q96L12 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
CALR3Q96L12 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CALR3Q96L12 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CALR3Q96L12 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CALR3Q96L12 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CALR3Q96L12 DUX4L13-201ENST00000554103 1267 ntBASIC25.83■■□□□ 1.73
CALR3Q96L12 DUX4L15-201ENST00000611059 1267 ntBASIC25.83■■□□□ 1.73
CALR3Q96L12 DUX4L23-201ENST00000615195 1269 ntBASIC25.83■■□□□ 1.73
CALR3Q96L12 DUX4L24-201ENST00000617576 1269 ntBASIC25.83■■□□□ 1.73
CALR3Q96L12 DUX4L22-201ENST00000618238 1269 ntBASIC25.83■■□□□ 1.73
CALR3Q96L12 DUX4L20-201ENST00000619712 1269 ntBASIC25.83■■□□□ 1.73
CALR3Q96L12 DUX4L21-201ENST00000622058 1269 ntBASIC25.83■■□□□ 1.73
CALR3Q96L12 DUX4L10-201ENST00000622460 1267 ntBASIC25.83■■□□□ 1.73
CALR3Q96L12 DUX4L25-201ENST00000624915 1269 ntBASIC25.83■■□□□ 1.73
CALR3Q96L12 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.82■■□□□ 1.72
CALR3Q96L12 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CALR3Q96L12 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.82■■□□□ 1.72
CALR3Q96L12 AC148477.6-201ENST00000623746 465 ntBASIC25.82■■□□□ 1.72
CALR3Q96L12 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.82■■□□□ 1.72
CALR3Q96L12 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CALR3Q96L12 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.82■■□□□ 1.72
CALR3Q96L12 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
CALR3Q96L12 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CALR3Q96L12 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CALR3Q96L12 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.8■■□□□ 1.72
CALR3Q96L12 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.8■■□□□ 1.72
CALR3Q96L12 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.8■■□□□ 1.72
CALR3Q96L12 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CALR3Q96L12 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CALR3Q96L12 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.79■■□□□ 1.72
CALR3Q96L12 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CALR3Q96L12 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CALR3Q96L12 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.78■■□□□ 1.72
CALR3Q96L12 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.78■■□□□ 1.72
CALR3Q96L12 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CALR3Q96L12 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CALR3Q96L12 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.77■■□□□ 1.72
CALR3Q96L12 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CALR3Q96L12 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.77■■□□□ 1.72
CALR3Q96L12 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
CALR3Q96L12 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.76■■□□□ 1.71
CALR3Q96L12 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.76■■□□□ 1.71
CALR3Q96L12 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CALR3Q96L12 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
CALR3Q96L12 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CALR3Q96L12 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.75■■□□□ 1.71
CALR3Q96L12 AC093323.1-202ENST00000635031 2045 ntBASIC25.75■■□□□ 1.71
CALR3Q96L12 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CALR3Q96L12 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CALR3Q96L12 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CALR3Q96L12 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CALR3Q96L12 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CALR3Q96L12 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CALR3Q96L12 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CALR3Q96L12 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CALR3Q96L12 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CALR3Q96L12 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CALR3Q96L12 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.73■■□□□ 1.71
CALR3Q96L12 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CALR3Q96L12 MIR219A2-201ENST00000608502 1504 ntBASIC25.73■■□□□ 1.71
CALR3Q96L12 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
CALR3Q96L12 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CALR3Q96L12 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CALR3Q96L12 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.72■■□□□ 1.71
CALR3Q96L12 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.72■■□□□ 1.71
CALR3Q96L12 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CALR3Q96L12 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CALR3Q96L12 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.71■■□□□ 1.71
CALR3Q96L12 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CALR3Q96L12 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CALR3Q96L12 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CALR3Q96L12 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms