Protein–RNA interactions for Protein: Q8WTV0

SCARB1, Scavenger receptor class B member 1, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1Q8WTV0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCARB1Q8WTV0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCARB1Q8WTV0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCARB1Q8WTV0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCARB1Q8WTV0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SCARB1Q8WTV0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCARB1Q8WTV0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCARB1Q8WTV0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.38■□□□□ 0.85
SCARB1Q8WTV0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCARB1Q8WTV0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCARB1Q8WTV0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCARB1Q8WTV0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCARB1Q8WTV0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCARB1Q8WTV0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCARB1Q8WTV0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SCARB1Q8WTV0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCARB1Q8WTV0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SCARB1Q8WTV0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.37■□□□□ 0.85
SCARB1Q8WTV0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SCARB1Q8WTV0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.37■□□□□ 0.85
SCARB1Q8WTV0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCARB1Q8WTV0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCARB1Q8WTV0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCARB1Q8WTV0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SCARB1Q8WTV0 SUZ12P1-203ENST00000578195 985 ntBASIC20.36■□□□□ 0.85
SCARB1Q8WTV0 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.36■□□□□ 0.85
SCARB1Q8WTV0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCARB1Q8WTV0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
SCARB1Q8WTV0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCARB1Q8WTV0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCARB1Q8WTV0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCARB1Q8WTV0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCARB1Q8WTV0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCARB1Q8WTV0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCARB1Q8WTV0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.34■□□□□ 0.85
SCARB1Q8WTV0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.34■□□□□ 0.85
SCARB1Q8WTV0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCARB1Q8WTV0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SCARB1Q8WTV0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCARB1Q8WTV0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SCARB1Q8WTV0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
SCARB1Q8WTV0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.33■□□□□ 0.85
SCARB1Q8WTV0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCARB1Q8WTV0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCARB1Q8WTV0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCARB1Q8WTV0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCARB1Q8WTV0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCARB1Q8WTV0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCARB1Q8WTV0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCARB1Q8WTV0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCARB1Q8WTV0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SCARB1Q8WTV0 AC142381.3-201ENST00000568208 1670 ntBASIC20.31■□□□□ 0.84
SCARB1Q8WTV0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCARB1Q8WTV0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.31■□□□□ 0.84
SCARB1Q8WTV0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCARB1Q8WTV0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCARB1Q8WTV0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCARB1Q8WTV0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.3■□□□□ 0.84
SCARB1Q8WTV0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCARB1Q8WTV0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCARB1Q8WTV0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCARB1Q8WTV0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCARB1Q8WTV0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCARB1Q8WTV0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
SCARB1Q8WTV0 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.29■□□□□ 0.84
SCARB1Q8WTV0 AL139125.2-201ENST00000623134 1869 ntBASIC20.28■□□□□ 0.84
SCARB1Q8WTV0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCARB1Q8WTV0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.28■□□□□ 0.84
SCARB1Q8WTV0 AC005559.1-201ENST00000589661 871 ntBASIC20.28■□□□□ 0.84
SCARB1Q8WTV0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCARB1Q8WTV0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.28■□□□□ 0.84
SCARB1Q8WTV0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCARB1Q8WTV0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SCARB1Q8WTV0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCARB1Q8WTV0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SCARB1Q8WTV0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCARB1Q8WTV0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCARB1Q8WTV0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCARB1Q8WTV0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SCARB1Q8WTV0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCARB1Q8WTV0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.27■□□□□ 0.83
SCARB1Q8WTV0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.27■□□□□ 0.83
SCARB1Q8WTV0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCARB1Q8WTV0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCARB1Q8WTV0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCARB1Q8WTV0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCARB1Q8WTV0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.26■□□□□ 0.83
SCARB1Q8WTV0 AC127502.1-201ENST00000399971 1502 ntBASIC20.26■□□□□ 0.83
SCARB1Q8WTV0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCARB1Q8WTV0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.25■□□□□ 0.83
SCARB1Q8WTV0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCARB1Q8WTV0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCARB1Q8WTV0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCARB1Q8WTV0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCARB1Q8WTV0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCARB1Q8WTV0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCARB1Q8WTV0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCARB1Q8WTV0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.24■□□□□ 0.83
SCARB1Q8WTV0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCARB1Q8WTV0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms