Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RPS4Y2Q8TD47 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPS4Y2Q8TD47 AC044849.2-201ENST00000606596 710 ntBASIC21.48■■□□□ 1.03
RPS4Y2Q8TD47 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RPS4Y2Q8TD47 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.48■■□□□ 1.03
RPS4Y2Q8TD47 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
RPS4Y2Q8TD47 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPS4Y2Q8TD47 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.47■■□□□ 1.03
RPS4Y2Q8TD47 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.47■■□□□ 1.03
RPS4Y2Q8TD47 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.47■■□□□ 1.03
RPS4Y2Q8TD47 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPS4Y2Q8TD47 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.46■■□□□ 1.03
RPS4Y2Q8TD47 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RPS4Y2Q8TD47 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPS4Y2Q8TD47 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPS4Y2Q8TD47 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPS4Y2Q8TD47 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPS4Y2Q8TD47 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RPS4Y2Q8TD47 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
RPS4Y2Q8TD47 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.45■■□□□ 1.02
RPS4Y2Q8TD47 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPS4Y2Q8TD47 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPS4Y2Q8TD47 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPS4Y2Q8TD47 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RPS4Y2Q8TD47 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPS4Y2Q8TD47 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.44■■□□□ 1.02
RPS4Y2Q8TD47 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPS4Y2Q8TD47 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RPS4Y2Q8TD47 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPS4Y2Q8TD47 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RPS4Y2Q8TD47 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPS4Y2Q8TD47 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPS4Y2Q8TD47 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPS4Y2Q8TD47 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPS4Y2Q8TD47 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.43■■□□□ 1.02
RPS4Y2Q8TD47 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.43■■□□□ 1.02
RPS4Y2Q8TD47 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.43■■□□□ 1.02
RPS4Y2Q8TD47 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPS4Y2Q8TD47 AC142381.3-201ENST00000568208 1670 ntBASIC21.43■■□□□ 1.02
RPS4Y2Q8TD47 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPS4Y2Q8TD47 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPS4Y2Q8TD47 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPS4Y2Q8TD47 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPS4Y2Q8TD47 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPS4Y2Q8TD47 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPS4Y2Q8TD47 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPS4Y2Q8TD47 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPS4Y2Q8TD47 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
RPS4Y2Q8TD47 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RPS4Y2Q8TD47 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPS4Y2Q8TD47 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPS4Y2Q8TD47 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPS4Y2Q8TD47 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RPS4Y2Q8TD47 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RPS4Y2Q8TD47 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPS4Y2Q8TD47 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.4■■□□□ 1.02
RPS4Y2Q8TD47 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RPS4Y2Q8TD47 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RPS4Y2Q8TD47 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.4■■□□□ 1.02
RPS4Y2Q8TD47 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.39■■□□□ 1.02
RPS4Y2Q8TD47 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.39■■□□□ 1.01
RPS4Y2Q8TD47 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPS4Y2Q8TD47 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RPS4Y2Q8TD47 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPS4Y2Q8TD47 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.38■■□□□ 1.01
RPS4Y2Q8TD47 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPS4Y2Q8TD47 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPS4Y2Q8TD47 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPS4Y2Q8TD47 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RPS4Y2Q8TD47 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPS4Y2Q8TD47 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.37■■□□□ 1.01
RPS4Y2Q8TD47 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPS4Y2Q8TD47 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPS4Y2Q8TD47 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPS4Y2Q8TD47 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPS4Y2Q8TD47 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPS4Y2Q8TD47 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.36■■□□□ 1.01
RPS4Y2Q8TD47 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RPS4Y2Q8TD47 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPS4Y2Q8TD47 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPS4Y2Q8TD47 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.35■■□□□ 1.01
RPS4Y2Q8TD47 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RPS4Y2Q8TD47 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RPS4Y2Q8TD47 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RPS4Y2Q8TD47 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
RPS4Y2Q8TD47 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.35■■□□□ 1.01
RPS4Y2Q8TD47 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPS4Y2Q8TD47 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPS4Y2Q8TD47 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPS4Y2Q8TD47 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPS4Y2Q8TD47 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPS4Y2Q8TD47 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPS4Y2Q8TD47 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPS4Y2Q8TD47 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.34■■□□□ 1.01
RPS4Y2Q8TD47 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.34■■□□□ 1.01
RPS4Y2Q8TD47 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPS4Y2Q8TD47 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.34■■□□□ 1.01
RPS4Y2Q8TD47 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPS4Y2Q8TD47 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPS4Y2Q8TD47 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms