Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.94■■□□□ 1.74
SMRP1Q8NCR6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.94■■□□□ 1.74
SMRP1Q8NCR6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
SMRP1Q8NCR6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMRP1Q8NCR6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMRP1Q8NCR6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SMRP1Q8NCR6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
SMRP1Q8NCR6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMRP1Q8NCR6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.92■■□□□ 1.74
SMRP1Q8NCR6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.92■■□□□ 1.74
SMRP1Q8NCR6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
SMRP1Q8NCR6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMRP1Q8NCR6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SMRP1Q8NCR6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SMRP1Q8NCR6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMRP1Q8NCR6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.91■■□□□ 1.74
SMRP1Q8NCR6 Z92544.1-202ENST00000571933 1220 ntBASIC25.91■■□□□ 1.74
SMRP1Q8NCR6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMRP1Q8NCR6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMRP1Q8NCR6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
SMRP1Q8NCR6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMRP1Q8NCR6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMRP1Q8NCR6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.9■■□□□ 1.74
SMRP1Q8NCR6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.9■■□□□ 1.74
SMRP1Q8NCR6 AC008406.3-201ENST00000620001 1374 ntBASIC25.9■■□□□ 1.74
SMRP1Q8NCR6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMRP1Q8NCR6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMRP1Q8NCR6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.89■■□□□ 1.73
SMRP1Q8NCR6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.89■■□□□ 1.73
SMRP1Q8NCR6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMRP1Q8NCR6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMRP1Q8NCR6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
SMRP1Q8NCR6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMRP1Q8NCR6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMRP1Q8NCR6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.87■■□□□ 1.73
SMRP1Q8NCR6 ST7-AS1-201ENST00000456775 1889 ntBASIC25.87■■□□□ 1.73
SMRP1Q8NCR6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.87■■□□□ 1.73
SMRP1Q8NCR6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.87■■□□□ 1.73
SMRP1Q8NCR6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.86■■□□□ 1.73
SMRP1Q8NCR6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.86■■□□□ 1.73
SMRP1Q8NCR6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
SMRP1Q8NCR6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMRP1Q8NCR6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMRP1Q8NCR6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SMRP1Q8NCR6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMRP1Q8NCR6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SMRP1Q8NCR6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMRP1Q8NCR6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
SMRP1Q8NCR6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.84■■□□□ 1.73
SMRP1Q8NCR6 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.84■■□□□ 1.73
SMRP1Q8NCR6 AC087393.1-201ENST00000582896 145 ntBASIC25.84■■□□□ 1.73
SMRP1Q8NCR6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMRP1Q8NCR6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMRP1Q8NCR6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.83■■□□□ 1.73
SMRP1Q8NCR6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMRP1Q8NCR6 AL359504.2-201ENST00000605506 1601 ntBASIC25.83■■□□□ 1.73
SMRP1Q8NCR6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.82■■□□□ 1.72
SMRP1Q8NCR6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SMRP1Q8NCR6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.81■■□□□ 1.72
SMRP1Q8NCR6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.81■■□□□ 1.72
SMRP1Q8NCR6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.8■■□□□ 1.72
SMRP1Q8NCR6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
SMRP1Q8NCR6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.79■■□□□ 1.72
SMRP1Q8NCR6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.79■■□□□ 1.72
SMRP1Q8NCR6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
SMRP1Q8NCR6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.79■■□□□ 1.72
SMRP1Q8NCR6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SMRP1Q8NCR6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMRP1Q8NCR6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMRP1Q8NCR6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SMRP1Q8NCR6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.77■■□□□ 1.72
SMRP1Q8NCR6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.77■■□□□ 1.72
SMRP1Q8NCR6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.77■■□□□ 1.72
SMRP1Q8NCR6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMRP1Q8NCR6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMRP1Q8NCR6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMRP1Q8NCR6 AP002414.2-202ENST00000590929 1450 ntBASIC25.75■■□□□ 1.71
SMRP1Q8NCR6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SMRP1Q8NCR6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMRP1Q8NCR6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
SMRP1Q8NCR6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMRP1Q8NCR6 LONRF2P2-201ENST00000439212 571 ntBASIC25.75■■□□□ 1.71
SMRP1Q8NCR6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.74■■□□□ 1.71
SMRP1Q8NCR6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SMRP1Q8NCR6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SMRP1Q8NCR6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.74■■□□□ 1.71
SMRP1Q8NCR6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
SMRP1Q8NCR6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMRP1Q8NCR6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMRP1Q8NCR6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
SMRP1Q8NCR6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.73■■□□□ 1.71
SMRP1Q8NCR6 KRT125P-201ENST00000546827 989 ntBASIC25.73■■□□□ 1.71
SMRP1Q8NCR6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.73■■□□□ 1.71
SMRP1Q8NCR6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMRP1Q8NCR6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SMRP1Q8NCR6 RPS2P7-201ENST00000447334 885 ntBASIC25.72■■□□□ 1.71
SMRP1Q8NCR6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.72■■□□□ 1.71
SMRP1Q8NCR6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.72■■□□□ 1.71
SMRP1Q8NCR6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMRP1Q8NCR6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms