Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TTC9CQ8N5M4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
TTC9CQ8N5M4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TTC9CQ8N5M4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TTC9CQ8N5M4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TTC9CQ8N5M4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TTC9CQ8N5M4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.33■□□□□ 0.69
TTC9CQ8N5M4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC9CQ8N5M4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC9CQ8N5M4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.33■□□□□ 0.68
TTC9CQ8N5M4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC9CQ8N5M4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC9CQ8N5M4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.3■□□□□ 0.68
TTC9CQ8N5M4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TTC9CQ8N5M4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TTC9CQ8N5M4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.3■□□□□ 0.68
TTC9CQ8N5M4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TTC9CQ8N5M4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TTC9CQ8N5M4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TTC9CQ8N5M4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TTC9CQ8N5M4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.29■□□□□ 0.68
TTC9CQ8N5M4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.29■□□□□ 0.68
TTC9CQ8N5M4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TTC9CQ8N5M4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
TTC9CQ8N5M4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TTC9CQ8N5M4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.28■□□□□ 0.68
TTC9CQ8N5M4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.28■□□□□ 0.68
TTC9CQ8N5M4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TTC9CQ8N5M4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.28■□□□□ 0.68
TTC9CQ8N5M4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.28■□□□□ 0.68
TTC9CQ8N5M4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC9CQ8N5M4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC9CQ8N5M4 AC091060.1-201ENST00000623524 1766 ntBASIC19.27■□□□□ 0.68
TTC9CQ8N5M4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.27■□□□□ 0.68
TTC9CQ8N5M4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TTC9CQ8N5M4 AL359504.2-201ENST00000605506 1601 ntBASIC19.27■□□□□ 0.68
TTC9CQ8N5M4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC9CQ8N5M4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TTC9CQ8N5M4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.27■□□□□ 0.68
TTC9CQ8N5M4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC9CQ8N5M4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TTC9CQ8N5M4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TTC9CQ8N5M4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TTC9CQ8N5M4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TTC9CQ8N5M4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TTC9CQ8N5M4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TTC9CQ8N5M4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TTC9CQ8N5M4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TTC9CQ8N5M4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TTC9CQ8N5M4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TTC9CQ8N5M4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TTC9CQ8N5M4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TTC9CQ8N5M4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.24■□□□□ 0.67
TTC9CQ8N5M4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TTC9CQ8N5M4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.24■□□□□ 0.67
TTC9CQ8N5M4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TTC9CQ8N5M4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC9CQ8N5M4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC9CQ8N5M4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC9CQ8N5M4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.23■□□□□ 0.67
TTC9CQ8N5M4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.23■□□□□ 0.67
TTC9CQ8N5M4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.23■□□□□ 0.67
TTC9CQ8N5M4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC9CQ8N5M4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC9CQ8N5M4 AC092803.2-201ENST00000564287 1899 ntBASIC19.22■□□□□ 0.67
TTC9CQ8N5M4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC9CQ8N5M4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC9CQ8N5M4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC9CQ8N5M4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC9CQ8N5M4 AC145676.1-201ENST00000514988 2004 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms