Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.56■■■□□ 2
CCDC60Q8IWA6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.56■■■□□ 2
CCDC60Q8IWA6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.55■■■□□ 2
CCDC60Q8IWA6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
CCDC60Q8IWA6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.55■■■□□ 2
CCDC60Q8IWA6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
CCDC60Q8IWA6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CCDC60Q8IWA6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.54■■■□□ 2
CCDC60Q8IWA6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
CCDC60Q8IWA6 AL033527.3-201ENST00000566366 1196 ntBASIC27.54■■■□□ 2
CCDC60Q8IWA6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.54■■■□□ 2
CCDC60Q8IWA6 RAP2CP1-202ENST00000605179 643 ntBASIC27.54■■■□□ 2
CCDC60Q8IWA6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.53■■■□□ 2
CCDC60Q8IWA6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.53■■■□□ 2
CCDC60Q8IWA6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CCDC60Q8IWA6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CCDC60Q8IWA6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.53■■■□□ 2
CCDC60Q8IWA6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.53■■■□□ 2
CCDC60Q8IWA6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CCDC60Q8IWA6 AC004987.1-201ENST00000428627 508 ntBASIC27.53■■■□□ 2
CCDC60Q8IWA6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CCDC60Q8IWA6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CCDC60Q8IWA6 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.51■■□□□ 1.99
CCDC60Q8IWA6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
CCDC60Q8IWA6 AC129492.7-201ENST00000622992 756 ntBASIC27.51■■□□□ 1.99
CCDC60Q8IWA6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC60Q8IWA6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC60Q8IWA6 ATP5G2P3-201ENST00000429083 425 ntBASIC27.5■■□□□ 1.99
CCDC60Q8IWA6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC60Q8IWA6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
CCDC60Q8IWA6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CCDC60Q8IWA6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
CCDC60Q8IWA6 TSPY13P-201ENST00000338964 914 ntBASIC27.48■■□□□ 1.99
CCDC60Q8IWA6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.48■■□□□ 1.99
CCDC60Q8IWA6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
CCDC60Q8IWA6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
CCDC60Q8IWA6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CCDC60Q8IWA6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.46■■□□□ 1.99
CCDC60Q8IWA6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.46■■□□□ 1.99
CCDC60Q8IWA6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.99
CCDC60Q8IWA6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
CCDC60Q8IWA6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CCDC60Q8IWA6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.44■■□□□ 1.98
CCDC60Q8IWA6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC60Q8IWA6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.44■■□□□ 1.98
CCDC60Q8IWA6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC60Q8IWA6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.43■■□□□ 1.98
CCDC60Q8IWA6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CCDC60Q8IWA6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CCDC60Q8IWA6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CCDC60Q8IWA6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
CCDC60Q8IWA6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CCDC60Q8IWA6 SPCS2P3-201ENST00000500401 656 ntBASIC27.42■■□□□ 1.98
CCDC60Q8IWA6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.42■■□□□ 1.98
CCDC60Q8IWA6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC60Q8IWA6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC60Q8IWA6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.41■■□□□ 1.98
CCDC60Q8IWA6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
CCDC60Q8IWA6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC60Q8IWA6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC60Q8IWA6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC60Q8IWA6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC60Q8IWA6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC60Q8IWA6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
CCDC60Q8IWA6 DUX4L9-201ENST00000449051 1259 ntBASIC27.4■■□□□ 1.98
CCDC60Q8IWA6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.4■■□□□ 1.98
CCDC60Q8IWA6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC60Q8IWA6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.39■■□□□ 1.98
CCDC60Q8IWA6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CCDC60Q8IWA6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.39■■□□□ 1.98
CCDC60Q8IWA6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CCDC60Q8IWA6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
CCDC60Q8IWA6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.97
CCDC60Q8IWA6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CCDC60Q8IWA6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC60Q8IWA6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC60Q8IWA6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.38■■□□□ 1.97
CCDC60Q8IWA6 DUX4L18-201ENST00000553347 1267 ntBASIC27.38■■□□□ 1.97
CCDC60Q8IWA6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.37■■□□□ 1.97
CCDC60Q8IWA6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CCDC60Q8IWA6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CCDC60Q8IWA6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.37■■□□□ 1.97
CCDC60Q8IWA6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.37■■□□□ 1.97
CCDC60Q8IWA6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CCDC60Q8IWA6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CCDC60Q8IWA6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC60Q8IWA6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC60Q8IWA6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC60Q8IWA6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC60Q8IWA6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CCDC60Q8IWA6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC60Q8IWA6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.36■■□□□ 1.97
CCDC60Q8IWA6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC60Q8IWA6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC60Q8IWA6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC60Q8IWA6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.35■■□□□ 1.97
CCDC60Q8IWA6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC60Q8IWA6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC60Q8IWA6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
CCDC60Q8IWA6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms