Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
ABCA9Q8IUA7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC38.41■■■■□ 3.74
ABCA9Q8IUA7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
ABCA9Q8IUA7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
ABCA9Q8IUA7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC38.4■■■■□ 3.74
ABCA9Q8IUA7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
ABCA9Q8IUA7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC38.4■■■■□ 3.74
ABCA9Q8IUA7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC38.39■■■■□ 3.74
ABCA9Q8IUA7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC38.39■■■■□ 3.74
ABCA9Q8IUA7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC38.39■■■■□ 3.74
ABCA9Q8IUA7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC38.38■■■■□ 3.74
ABCA9Q8IUA7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC38.38■■■■□ 3.73
ABCA9Q8IUA7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC38.38■■■■□ 3.73
ABCA9Q8IUA7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC38.37■■■■□ 3.73
ABCA9Q8IUA7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC38.37■■■■□ 3.73
ABCA9Q8IUA7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC38.36■■■■□ 3.73
ABCA9Q8IUA7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
ABCA9Q8IUA7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC38.36■■■■□ 3.73
ABCA9Q8IUA7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
ABCA9Q8IUA7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC38.35■■■■□ 3.73
ABCA9Q8IUA7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
ABCA9Q8IUA7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC38.34■■■■□ 3.73
ABCA9Q8IUA7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC38.34■■■■□ 3.73
ABCA9Q8IUA7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC38.34■■■■□ 3.73
ABCA9Q8IUA7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC38.34■■■■□ 3.73
ABCA9Q8IUA7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
ABCA9Q8IUA7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
ABCA9Q8IUA7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC38.33■■■■□ 3.73
ABCA9Q8IUA7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC38.33■■■■□ 3.73
ABCA9Q8IUA7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
ABCA9Q8IUA7 GRAMD4P7-201ENST00000578182 1232 ntBASIC38.32■■■■□ 3.73
ABCA9Q8IUA7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC38.32■■■■□ 3.72
ABCA9Q8IUA7 AC239859.2-201ENST00000444165 318 ntBASIC38.31■■■■□ 3.72
ABCA9Q8IUA7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC38.31■■■■□ 3.72
ABCA9Q8IUA7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC38.3■■■■□ 3.72
ABCA9Q8IUA7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC38.3■■■■□ 3.72
ABCA9Q8IUA7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC38.3■■■■□ 3.72
ABCA9Q8IUA7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC38.29■■■■□ 3.72
ABCA9Q8IUA7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC38.29■■■■□ 3.72
ABCA9Q8IUA7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC38.28■■■■□ 3.72
ABCA9Q8IUA7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC38.27■■■■□ 3.72
ABCA9Q8IUA7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC38.27■■■■□ 3.72
ABCA9Q8IUA7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC38.27■■■■□ 3.72
ABCA9Q8IUA7 AC087393.1-201ENST00000582896 145 ntBASIC38.27■■■■□ 3.72
ABCA9Q8IUA7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC38.27■■■■□ 3.72
ABCA9Q8IUA7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
ABCA9Q8IUA7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC38.27■■■■□ 3.72
ABCA9Q8IUA7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
ABCA9Q8IUA7 ST7-AS1-201ENST00000456775 1889 ntBASIC38.26■■■■□ 3.72
ABCA9Q8IUA7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC38.26■■■■□ 3.71
ABCA9Q8IUA7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.71
ABCA9Q8IUA7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC38.25■■■■□ 3.71
ABCA9Q8IUA7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC38.25■■■■□ 3.71
ABCA9Q8IUA7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC38.25■■■■□ 3.71
ABCA9Q8IUA7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
ABCA9Q8IUA7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
ABCA9Q8IUA7 AL359504.2-201ENST00000605506 1601 ntBASIC38.24■■■■□ 3.71
ABCA9Q8IUA7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
ABCA9Q8IUA7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC38.23■■■■□ 3.71
ABCA9Q8IUA7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC38.23■■■■□ 3.71
ABCA9Q8IUA7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC38.23■■■■□ 3.71
ABCA9Q8IUA7 AC008406.3-201ENST00000620001 1374 ntBASIC38.23■■■■□ 3.71
ABCA9Q8IUA7 MIR638-201ENST00000385237 100 ntBASIC38.22■■■■□ 3.71
ABCA9Q8IUA7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
ABCA9Q8IUA7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC38.22■■■■□ 3.71
ABCA9Q8IUA7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
ABCA9Q8IUA7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
ABCA9Q8IUA7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
ABCA9Q8IUA7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
ABCA9Q8IUA7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC38.2■■■■□ 3.7
ABCA9Q8IUA7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
ABCA9Q8IUA7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC38.19■■■■□ 3.7
ABCA9Q8IUA7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC38.18■■■■□ 3.7
ABCA9Q8IUA7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC38.18■■■■□ 3.7
ABCA9Q8IUA7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC38.18■■■■□ 3.7
ABCA9Q8IUA7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
ABCA9Q8IUA7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC38.16■■■■□ 3.7
ABCA9Q8IUA7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC38.16■■■■□ 3.7
ABCA9Q8IUA7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
ABCA9Q8IUA7 AP002414.2-202ENST00000590929 1450 ntBASIC38.16■■■■□ 3.7
ABCA9Q8IUA7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC38.16■■■■□ 3.7
ABCA9Q8IUA7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
ABCA9Q8IUA7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
ABCA9Q8IUA7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
ABCA9Q8IUA7 UNC93B8-201ENST00000511903 705 ntBASIC38.14■■■■□ 3.7
ABCA9Q8IUA7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
ABCA9Q8IUA7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC38.14■■■■□ 3.7
ABCA9Q8IUA7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC38.13■■■■□ 3.7
ABCA9Q8IUA7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC38.13■■■■□ 3.69
ABCA9Q8IUA7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC38.12■■■■□ 3.69
ABCA9Q8IUA7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
ABCA9Q8IUA7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
ABCA9Q8IUA7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC38.11■■■■□ 3.69
ABCA9Q8IUA7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC38.11■■■■□ 3.69
ABCA9Q8IUA7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC38.11■■■■□ 3.69
ABCA9Q8IUA7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC38.1■■■■□ 3.69
ABCA9Q8IUA7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
ABCA9Q8IUA7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC38.1■■■■□ 3.69
ABCA9Q8IUA7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
ABCA9Q8IUA7 RPS2P7-201ENST00000447334 885 ntBASIC38.09■■■■□ 3.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms