Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.02■□□□□ 0.8
SSX9Q7RTT3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SSX9Q7RTT3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX9Q7RTT3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSX9Q7RTT3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.01■□□□□ 0.79
SSX9Q7RTT3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX9Q7RTT3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
SSX9Q7RTT3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.01■□□□□ 0.79
SSX9Q7RTT3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20■□□□□ 0.79
SSX9Q7RTT3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SSX9Q7RTT3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SSX9Q7RTT3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SSX9Q7RTT3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX9Q7RTT3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20■□□□□ 0.79
SSX9Q7RTT3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX9Q7RTT3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX9Q7RTT3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSX9Q7RTT3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20■□□□□ 0.79
SSX9Q7RTT3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX9Q7RTT3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSX9Q7RTT3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.99■□□□□ 0.79
SSX9Q7RTT3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SSX9Q7RTT3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSX9Q7RTT3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX9Q7RTT3 AC145676.1-201ENST00000514988 2004 ntBASIC19.98■□□□□ 0.79
SSX9Q7RTT3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX9Q7RTT3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX9Q7RTT3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.98■□□□□ 0.79
SSX9Q7RTT3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX9Q7RTT3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX9Q7RTT3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.98■□□□□ 0.79
SSX9Q7RTT3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX9Q7RTT3 WHAMMP3-201ENST00000611636 1609 ntBASIC19.98■□□□□ 0.79
SSX9Q7RTT3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSX9Q7RTT3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX9Q7RTT3 RPS2P35-201ENST00000443417 897 ntBASIC19.97■□□□□ 0.79
SSX9Q7RTT3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX9Q7RTT3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSX9Q7RTT3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX9Q7RTT3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.96■□□□□ 0.79
SSX9Q7RTT3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX9Q7RTT3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX9Q7RTT3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
SSX9Q7RTT3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSX9Q7RTT3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX9Q7RTT3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSX9Q7RTT3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.95■□□□□ 0.78
SSX9Q7RTT3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSX9Q7RTT3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.95■□□□□ 0.78
SSX9Q7RTT3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.95■□□□□ 0.78
SSX9Q7RTT3 AC092803.2-201ENST00000564287 1899 ntBASIC19.94■□□□□ 0.78
SSX9Q7RTT3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSX9Q7RTT3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSX9Q7RTT3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.94■□□□□ 0.78
SSX9Q7RTT3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.94■□□□□ 0.78
SSX9Q7RTT3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSX9Q7RTT3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSX9Q7RTT3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX9Q7RTT3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSX9Q7RTT3 AC142472.1-201ENST00000612013 1741 ntBASIC19.93■□□□□ 0.78
SSX9Q7RTT3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.93■□□□□ 0.78
SSX9Q7RTT3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX9Q7RTT3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SSX9Q7RTT3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.92■□□□□ 0.78
SSX9Q7RTT3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SSX9Q7RTT3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX9Q7RTT3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SSX9Q7RTT3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.92■□□□□ 0.78
SSX9Q7RTT3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.92■□□□□ 0.78
SSX9Q7RTT3 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.92■□□□□ 0.78
SSX9Q7RTT3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.92■□□□□ 0.78
SSX9Q7RTT3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSX9Q7RTT3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSX9Q7RTT3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSX9Q7RTT3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.91■□□□□ 0.78
SSX9Q7RTT3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX9Q7RTT3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX9Q7RTT3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX9Q7RTT3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX9Q7RTT3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.9■□□□□ 0.78
SSX9Q7RTT3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.9■□□□□ 0.78
SSX9Q7RTT3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX9Q7RTT3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX9Q7RTT3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.9■□□□□ 0.78
SSX9Q7RTT3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX9Q7RTT3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSX9Q7RTT3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX9Q7RTT3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX9Q7RTT3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.88■□□□□ 0.77
SSX9Q7RTT3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX9Q7RTT3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.87■□□□□ 0.77
SSX9Q7RTT3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.87■□□□□ 0.77
SSX9Q7RTT3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX9Q7RTT3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SSX9Q7RTT3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX9Q7RTT3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.87■□□□□ 0.77
SSX9Q7RTT3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SSX9Q7RTT3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSX9Q7RTT3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SSX9Q7RTT3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms