Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.67■■■□□ 2.66
SMIM5Q71RC9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.67■■■□□ 2.66
SMIM5Q71RC9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SMIM5Q71RC9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.66■■■□□ 2.66
SMIM5Q71RC9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMIM5Q71RC9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMIM5Q71RC9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.66■■■□□ 2.66
SMIM5Q71RC9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.65■■■□□ 2.66
SMIM5Q71RC9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMIM5Q71RC9 MIR935-201ENST00000401179 91 ntBASIC31.65■■■□□ 2.66
SMIM5Q71RC9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMIM5Q71RC9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMIM5Q71RC9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
SMIM5Q71RC9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
SMIM5Q71RC9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SMIM5Q71RC9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.64■■■□□ 2.66
SMIM5Q71RC9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.64■■■□□ 2.66
SMIM5Q71RC9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
SMIM5Q71RC9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SMIM5Q71RC9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SMIM5Q71RC9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SMIM5Q71RC9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
SMIM5Q71RC9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.63■■■□□ 2.65
SMIM5Q71RC9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMIM5Q71RC9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.63■■■□□ 2.65
SMIM5Q71RC9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.63■■■□□ 2.65
SMIM5Q71RC9 AL359504.2-201ENST00000605506 1601 ntBASIC31.63■■■□□ 2.65
SMIM5Q71RC9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SMIM5Q71RC9 AC239859.2-201ENST00000444165 318 ntBASIC31.62■■■□□ 2.65
SMIM5Q71RC9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SMIM5Q71RC9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.62■■■□□ 2.65
SMIM5Q71RC9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SMIM5Q71RC9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.61■■■□□ 2.65
SMIM5Q71RC9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.6■■■□□ 2.65
SMIM5Q71RC9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
SMIM5Q71RC9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.59■■■□□ 2.65
SMIM5Q71RC9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
SMIM5Q71RC9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.58■■■□□ 2.65
SMIM5Q71RC9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.57■■■□□ 2.64
SMIM5Q71RC9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SMIM5Q71RC9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SMIM5Q71RC9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SMIM5Q71RC9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
SMIM5Q71RC9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMIM5Q71RC9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
SMIM5Q71RC9 AL139393.2-201ENST00000608721 2025 ntBASIC31.54■■■□□ 2.64
SMIM5Q71RC9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
SMIM5Q71RC9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMIM5Q71RC9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SMIM5Q71RC9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMIM5Q71RC9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
SMIM5Q71RC9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SMIM5Q71RC9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.5■■■□□ 2.63
SMIM5Q71RC9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.5■■■□□ 2.63
SMIM5Q71RC9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.5■■■□□ 2.63
SMIM5Q71RC9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SMIM5Q71RC9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMIM5Q71RC9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SMIM5Q71RC9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMIM5Q71RC9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
SMIM5Q71RC9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
SMIM5Q71RC9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMIM5Q71RC9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
SMIM5Q71RC9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.49■■■□□ 2.63
SMIM5Q71RC9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
SMIM5Q71RC9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMIM5Q71RC9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.48■■■□□ 2.63
SMIM5Q71RC9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.48■■■□□ 2.63
SMIM5Q71RC9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.48■■■□□ 2.63
SMIM5Q71RC9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.48■■■□□ 2.63
SMIM5Q71RC9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
SMIM5Q71RC9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMIM5Q71RC9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.47■■■□□ 2.63
SMIM5Q71RC9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
SMIM5Q71RC9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
SMIM5Q71RC9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SMIM5Q71RC9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
SMIM5Q71RC9 AP002414.2-202ENST00000590929 1450 ntBASIC31.45■■■□□ 2.62
SMIM5Q71RC9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMIM5Q71RC9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
SMIM5Q71RC9 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.44■■■□□ 2.62
SMIM5Q71RC9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMIM5Q71RC9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.43■■■□□ 2.62
SMIM5Q71RC9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.43■■■□□ 2.62
SMIM5Q71RC9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SMIM5Q71RC9 AC008406.3-201ENST00000620001 1374 ntBASIC31.43■■■□□ 2.62
SMIM5Q71RC9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SMIM5Q71RC9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.42■■■□□ 2.62
SMIM5Q71RC9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.42■■■□□ 2.62
SMIM5Q71RC9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.42■■■□□ 2.62
SMIM5Q71RC9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.42■■■□□ 2.62
SMIM5Q71RC9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMIM5Q71RC9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMIM5Q71RC9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMIM5Q71RC9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMIM5Q71RC9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
SMIM5Q71RC9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.39■■■□□ 2.62
SMIM5Q71RC9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SMIM5Q71RC9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
SMIM5Q71RC9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms