Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COLCA1Q6ZS62 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COLCA1Q6ZS62 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.24■□□□□ 0.99
COLCA1Q6ZS62 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.24■□□□□ 0.99
COLCA1Q6ZS62 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.24■□□□□ 0.99
COLCA1Q6ZS62 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COLCA1Q6ZS62 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.23■□□□□ 0.99
COLCA1Q6ZS62 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
COLCA1Q6ZS62 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
COLCA1Q6ZS62 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.23■□□□□ 0.99
COLCA1Q6ZS62 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COLCA1Q6ZS62 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
COLCA1Q6ZS62 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COLCA1Q6ZS62 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COLCA1Q6ZS62 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COLCA1Q6ZS62 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.23■□□□□ 0.99
COLCA1Q6ZS62 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COLCA1Q6ZS62 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COLCA1Q6ZS62 AL359504.2-201ENST00000605506 1601 ntBASIC21.22■□□□□ 0.99
COLCA1Q6ZS62 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COLCA1Q6ZS62 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COLCA1Q6ZS62 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.22■□□□□ 0.99
COLCA1Q6ZS62 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
COLCA1Q6ZS62 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COLCA1Q6ZS62 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.22■□□□□ 0.99
COLCA1Q6ZS62 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COLCA1Q6ZS62 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COLCA1Q6ZS62 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COLCA1Q6ZS62 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
COLCA1Q6ZS62 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
COLCA1Q6ZS62 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COLCA1Q6ZS62 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
COLCA1Q6ZS62 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.2■□□□□ 0.98
COLCA1Q6ZS62 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.2■□□□□ 0.98
COLCA1Q6ZS62 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COLCA1Q6ZS62 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COLCA1Q6ZS62 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COLCA1Q6ZS62 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
COLCA1Q6ZS62 AC060814.1-201ENST00000554326 538 ntBASIC21.2■□□□□ 0.98
COLCA1Q6ZS62 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COLCA1Q6ZS62 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COLCA1Q6ZS62 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
COLCA1Q6ZS62 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COLCA1Q6ZS62 AC091060.1-201ENST00000623524 1766 ntBASIC21.19■□□□□ 0.98
COLCA1Q6ZS62 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COLCA1Q6ZS62 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.18■□□□□ 0.98
COLCA1Q6ZS62 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
COLCA1Q6ZS62 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
COLCA1Q6ZS62 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COLCA1Q6ZS62 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COLCA1Q6ZS62 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COLCA1Q6ZS62 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COLCA1Q6ZS62 AL157400.5-201ENST00000507624 621 ntBASIC21.17■□□□□ 0.98
COLCA1Q6ZS62 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.17■□□□□ 0.98
COLCA1Q6ZS62 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COLCA1Q6ZS62 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
COLCA1Q6ZS62 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COLCA1Q6ZS62 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COLCA1Q6ZS62 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COLCA1Q6ZS62 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
COLCA1Q6ZS62 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COLCA1Q6ZS62 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COLCA1Q6ZS62 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COLCA1Q6ZS62 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COLCA1Q6ZS62 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COLCA1Q6ZS62 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COLCA1Q6ZS62 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.14■□□□□ 0.97
COLCA1Q6ZS62 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COLCA1Q6ZS62 AC092296.2-201ENST00000589470 999 ntBASIC21.14■□□□□ 0.97
COLCA1Q6ZS62 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.13■□□□□ 0.97
COLCA1Q6ZS62 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
COLCA1Q6ZS62 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COLCA1Q6ZS62 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COLCA1Q6ZS62 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.13■□□□□ 0.97
COLCA1Q6ZS62 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COLCA1Q6ZS62 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COLCA1Q6ZS62 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COLCA1Q6ZS62 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COLCA1Q6ZS62 AC092803.2-201ENST00000564287 1899 ntBASIC21.13■□□□□ 0.97
COLCA1Q6ZS62 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COLCA1Q6ZS62 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COLCA1Q6ZS62 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COLCA1Q6ZS62 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COLCA1Q6ZS62 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
COLCA1Q6ZS62 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
COLCA1Q6ZS62 AC145676.1-201ENST00000514988 2004 ntBASIC21.12■□□□□ 0.97
COLCA1Q6ZS62 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.11■□□□□ 0.97
COLCA1Q6ZS62 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.11■□□□□ 0.97
COLCA1Q6ZS62 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COLCA1Q6ZS62 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
COLCA1Q6ZS62 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
COLCA1Q6ZS62 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.11■□□□□ 0.97
COLCA1Q6ZS62 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.11■□□□□ 0.97
COLCA1Q6ZS62 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.11■□□□□ 0.97
COLCA1Q6ZS62 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COLCA1Q6ZS62 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
COLCA1Q6ZS62 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COLCA1Q6ZS62 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COLCA1Q6ZS62 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COLCA1Q6ZS62 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms