Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
DCLRE1AQ6PJP8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.43■■□□□ 1.82
DCLRE1AQ6PJP8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
DCLRE1AQ6PJP8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.43■■□□□ 1.82
DCLRE1AQ6PJP8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
DCLRE1AQ6PJP8 LINC01003-201ENST00000564834 1764 ntBASIC26.43■■□□□ 1.82
DCLRE1AQ6PJP8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DCLRE1AQ6PJP8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DCLRE1AQ6PJP8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.42■■□□□ 1.82
DCLRE1AQ6PJP8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.42■■□□□ 1.82
DCLRE1AQ6PJP8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DCLRE1AQ6PJP8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
DCLRE1AQ6PJP8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DCLRE1AQ6PJP8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
DCLRE1AQ6PJP8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DCLRE1AQ6PJP8 DUX4L18-201ENST00000553347 1267 ntBASIC26.41■■□□□ 1.82
DCLRE1AQ6PJP8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.4■■□□□ 1.82
DCLRE1AQ6PJP8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
DCLRE1AQ6PJP8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
DCLRE1AQ6PJP8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.39■■□□□ 1.82
DCLRE1AQ6PJP8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
DCLRE1AQ6PJP8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
DCLRE1AQ6PJP8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
DCLRE1AQ6PJP8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.38■■□□□ 1.81
DCLRE1AQ6PJP8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.38■■□□□ 1.81
DCLRE1AQ6PJP8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
DCLRE1AQ6PJP8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
DCLRE1AQ6PJP8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.37■■□□□ 1.81
DCLRE1AQ6PJP8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.36■■□□□ 1.81
DCLRE1AQ6PJP8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
DCLRE1AQ6PJP8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
DCLRE1AQ6PJP8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
DCLRE1AQ6PJP8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
DCLRE1AQ6PJP8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.36■■□□□ 1.81
DCLRE1AQ6PJP8 DUX4L9-201ENST00000449051 1259 ntBASIC26.36■■□□□ 1.81
DCLRE1AQ6PJP8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
DCLRE1AQ6PJP8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
DCLRE1AQ6PJP8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
DCLRE1AQ6PJP8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DCLRE1AQ6PJP8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.35■■□□□ 1.81
DCLRE1AQ6PJP8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.35■■□□□ 1.81
DCLRE1AQ6PJP8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
DCLRE1AQ6PJP8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DCLRE1AQ6PJP8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
DCLRE1AQ6PJP8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.34■■□□□ 1.81
DCLRE1AQ6PJP8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.34■■□□□ 1.81
DCLRE1AQ6PJP8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
DCLRE1AQ6PJP8 AL449106.1-201ENST00000608517 1980 ntBASIC26.33■■□□□ 1.81
DCLRE1AQ6PJP8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
DCLRE1AQ6PJP8 SPCS2P3-201ENST00000500401 656 ntBASIC26.33■■□□□ 1.81
DCLRE1AQ6PJP8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
DCLRE1AQ6PJP8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
DCLRE1AQ6PJP8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
DCLRE1AQ6PJP8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DCLRE1AQ6PJP8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DCLRE1AQ6PJP8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
DCLRE1AQ6PJP8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
DCLRE1AQ6PJP8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
DCLRE1AQ6PJP8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DCLRE1AQ6PJP8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DCLRE1AQ6PJP8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DCLRE1AQ6PJP8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DCLRE1AQ6PJP8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.3■■□□□ 1.8
DCLRE1AQ6PJP8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
DCLRE1AQ6PJP8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.3■■□□□ 1.8
DCLRE1AQ6PJP8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.3■■□□□ 1.8
DCLRE1AQ6PJP8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.3■■□□□ 1.8
DCLRE1AQ6PJP8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DCLRE1AQ6PJP8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DCLRE1AQ6PJP8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DCLRE1AQ6PJP8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
DCLRE1AQ6PJP8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
DCLRE1AQ6PJP8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
DCLRE1AQ6PJP8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.29■■□□□ 1.8
DCLRE1AQ6PJP8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DCLRE1AQ6PJP8 RARRES2P1-201ENST00000474487 481 ntBASIC26.29■■□□□ 1.8
DCLRE1AQ6PJP8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.29■■□□□ 1.8
DCLRE1AQ6PJP8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DCLRE1AQ6PJP8 BX255925.1-201ENST00000566954 1854 ntBASIC26.28■■□□□ 1.8
DCLRE1AQ6PJP8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
DCLRE1AQ6PJP8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.28■■□□□ 1.8
DCLRE1AQ6PJP8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.28■■□□□ 1.8
DCLRE1AQ6PJP8 AC018755.3-202ENST00000596210 929 ntBASIC26.28■■□□□ 1.8
DCLRE1AQ6PJP8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DCLRE1AQ6PJP8 MIR6765-201ENST00000614092 87 ntBASIC26.27■■□□□ 1.8
DCLRE1AQ6PJP8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.27■■□□□ 1.8
DCLRE1AQ6PJP8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
DCLRE1AQ6PJP8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DCLRE1AQ6PJP8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.26■■□□□ 1.79
DCLRE1AQ6PJP8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DCLRE1AQ6PJP8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
DCLRE1AQ6PJP8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
DCLRE1AQ6PJP8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
DCLRE1AQ6PJP8 AC142086.6-201ENST00000621154 1765 ntBASIC26.25■■□□□ 1.79
DCLRE1AQ6PJP8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DCLRE1AQ6PJP8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DCLRE1AQ6PJP8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DCLRE1AQ6PJP8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
DCLRE1AQ6PJP8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.24■■□□□ 1.79
DCLRE1AQ6PJP8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms