Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.43■□□□□ 0.54
MRPL54Q6P161 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
MRPL54Q6P161 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
MRPL54Q6P161 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.43■□□□□ 0.54
MRPL54Q6P161 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL54Q6P161 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL54Q6P161 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL54Q6P161 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
MRPL54Q6P161 AC142381.3-201ENST00000568208 1670 ntBASIC18.41■□□□□ 0.54
MRPL54Q6P161 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL54Q6P161 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL54Q6P161 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL54Q6P161 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL54Q6P161 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL54Q6P161 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL54Q6P161 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.41■□□□□ 0.54
MRPL54Q6P161 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MRPL54Q6P161 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
MRPL54Q6P161 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL54Q6P161 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL54Q6P161 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL54Q6P161 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MRPL54Q6P161 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL54Q6P161 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL54Q6P161 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
MRPL54Q6P161 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL54Q6P161 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL54Q6P161 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL54Q6P161 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MRPL54Q6P161 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
MRPL54Q6P161 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL54Q6P161 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL54Q6P161 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL54Q6P161 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL54Q6P161 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.39■□□□□ 0.53
MRPL54Q6P161 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.39■□□□□ 0.53
MRPL54Q6P161 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL54Q6P161 ZNRF2P1-201ENST00000441407 443 ntBASIC18.38■□□□□ 0.53
MRPL54Q6P161 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.38■□□□□ 0.53
MRPL54Q6P161 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL54Q6P161 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL54Q6P161 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL54Q6P161 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL54Q6P161 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MRPL54Q6P161 AC012676.1-201ENST00000574705 1949 ntBASIC18.37■□□□□ 0.53
MRPL54Q6P161 AL133380.1-201ENST00000506013 324 ntBASIC18.37■□□□□ 0.53
MRPL54Q6P161 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL54Q6P161 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL54Q6P161 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.37■□□□□ 0.53
MRPL54Q6P161 AL139125.2-201ENST00000623134 1869 ntBASIC18.37■□□□□ 0.53
MRPL54Q6P161 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.37■□□□□ 0.53
MRPL54Q6P161 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL54Q6P161 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL54Q6P161 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL54Q6P161 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL54Q6P161 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL54Q6P161 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL54Q6P161 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.36■□□□□ 0.53
MRPL54Q6P161 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL54Q6P161 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL54Q6P161 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL54Q6P161 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL54Q6P161 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MRPL54Q6P161 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.35■□□□□ 0.53
MRPL54Q6P161 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.35■□□□□ 0.53
MRPL54Q6P161 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL54Q6P161 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL54Q6P161 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.35■□□□□ 0.53
MRPL54Q6P161 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
MRPL54Q6P161 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL54Q6P161 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL54Q6P161 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL54Q6P161 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.34■□□□□ 0.53
MRPL54Q6P161 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL54Q6P161 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.34■□□□□ 0.53
MRPL54Q6P161 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL54Q6P161 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL54Q6P161 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL54Q6P161 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL54Q6P161 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL54Q6P161 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.34■□□□□ 0.53
MRPL54Q6P161 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL54Q6P161 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MRPL54Q6P161 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
MRPL54Q6P161 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MRPL54Q6P161 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
MRPL54Q6P161 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.33■□□□□ 0.52
MRPL54Q6P161 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRPL54Q6P161 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRPL54Q6P161 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
MRPL54Q6P161 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL54Q6P161 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL54Q6P161 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL54Q6P161 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.32■□□□□ 0.52
MRPL54Q6P161 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL54Q6P161 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
MRPL54Q6P161 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL54Q6P161 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL54Q6P161 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL54Q6P161 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms