Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC30Q5VVM6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.53■■■□□ 2.64
CCDC30Q5VVM6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC30Q5VVM6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC30Q5VVM6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC30Q5VVM6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
CCDC30Q5VVM6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
CCDC30Q5VVM6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
CCDC30Q5VVM6 AC093536.1-201ENST00000569153 554 ntBASIC31.51■■■□□ 2.63
CCDC30Q5VVM6 AC026202.3-201ENST00000600805 1127 ntBASIC31.51■■■□□ 2.63
CCDC30Q5VVM6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
CCDC30Q5VVM6 AC009831.1-201ENST00000580420 1582 ntBASIC31.51■■■□□ 2.63
CCDC30Q5VVM6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC30Q5VVM6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC30Q5VVM6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC30Q5VVM6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
CCDC30Q5VVM6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC30Q5VVM6 AC133552.2-201ENST00000619106 1032 ntBASIC31.49■■■□□ 2.63
CCDC30Q5VVM6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.48■■■□□ 2.63
CCDC30Q5VVM6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCDC30Q5VVM6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.48■■■□□ 2.63
CCDC30Q5VVM6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
CCDC30Q5VVM6 KRT18P60-201ENST00000312876 1297 ntBASIC31.46■■■□□ 2.63
CCDC30Q5VVM6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC30Q5VVM6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.46■■■□□ 2.63
CCDC30Q5VVM6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
CCDC30Q5VVM6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
CCDC30Q5VVM6 RAP2CP1-202ENST00000605179 643 ntBASIC31.45■■■□□ 2.63
CCDC30Q5VVM6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC30Q5VVM6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC30Q5VVM6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC30Q5VVM6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC30Q5VVM6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.44■■■□□ 2.62
CCDC30Q5VVM6 AC142472.1-201ENST00000612013 1741 ntBASIC31.44■■■□□ 2.62
CCDC30Q5VVM6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
CCDC30Q5VVM6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC30Q5VVM6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC30Q5VVM6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC30Q5VVM6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.43■■■□□ 2.62
CCDC30Q5VVM6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC30Q5VVM6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
CCDC30Q5VVM6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.43■■■□□ 2.62
CCDC30Q5VVM6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC30Q5VVM6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
CCDC30Q5VVM6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC30Q5VVM6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC30Q5VVM6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
CCDC30Q5VVM6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC30Q5VVM6 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.42■■■□□ 2.62
CCDC30Q5VVM6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.42■■■□□ 2.62
CCDC30Q5VVM6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC30Q5VVM6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC30Q5VVM6 AL592293.1-201ENST00000502889 1188 ntBASIC31.41■■■□□ 2.62
CCDC30Q5VVM6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC30Q5VVM6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.41■■■□□ 2.62
CCDC30Q5VVM6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC30Q5VVM6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC30Q5VVM6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.4■■■□□ 2.62
CCDC30Q5VVM6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.4■■■□□ 2.62
CCDC30Q5VVM6 AP004609.3-201ENST00000610705 1884 ntBASIC31.4■■■□□ 2.62
CCDC30Q5VVM6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.39■■■□□ 2.62
CCDC30Q5VVM6 AC012354.3-201ENST00000623734 483 ntBASIC31.39■■■□□ 2.62
CCDC30Q5VVM6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.61
CCDC30Q5VVM6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
CCDC30Q5VVM6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.38■■■□□ 2.61
CCDC30Q5VVM6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC30Q5VVM6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC30Q5VVM6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC30Q5VVM6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC30Q5VVM6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC30Q5VVM6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.36■■■□□ 2.61
CCDC30Q5VVM6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.35■■■□□ 2.61
CCDC30Q5VVM6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC30Q5VVM6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC30Q5VVM6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC30Q5VVM6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC30Q5VVM6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC30Q5VVM6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
CCDC30Q5VVM6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC30Q5VVM6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC30Q5VVM6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC30Q5VVM6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC30Q5VVM6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC30Q5VVM6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
CCDC30Q5VVM6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.32■■■□□ 2.6
CCDC30Q5VVM6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC30Q5VVM6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC30Q5VVM6 AC129492.7-201ENST00000622992 756 ntBASIC31.31■■■□□ 2.6
CCDC30Q5VVM6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC30Q5VVM6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC30Q5VVM6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
CCDC30Q5VVM6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC30Q5VVM6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCDC30Q5VVM6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCDC30Q5VVM6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
CCDC30Q5VVM6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCDC30Q5VVM6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.29■■■□□ 2.6
CCDC30Q5VVM6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.28■■■□□ 2.6
CCDC30Q5VVM6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC30Q5VVM6 AC004987.1-201ENST00000428627 508 ntBASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms