Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 AL139393.2-201ENST00000608721 2025 ntBASIC12.25□□□□□ -0.45
LINC01554Q52M75 MVK-208ENST00000539696 608 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC01554Q52M75 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01554Q52M75 AC142086.6-201ENST00000621154 1765 ntBASIC12.25□□□□□ -0.45
LINC01554Q52M75 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01554Q52M75 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01554Q52M75 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01554Q52M75 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01554Q52M75 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
LINC01554Q52M75 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01554Q52M75 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01554Q52M75 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01554Q52M75 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01554Q52M75 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01554Q52M75 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01554Q52M75 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
LINC01554Q52M75 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01554Q52M75 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC01554Q52M75 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01554Q52M75 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
LINC01554Q52M75 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LINC01554Q52M75 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
LINC01554Q52M75 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01554Q52M75 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01554Q52M75 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01554Q52M75 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01554Q52M75 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01554Q52M75 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LINC01554Q52M75 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01554Q52M75 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01554Q52M75 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01554Q52M75 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01554Q52M75 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC01554Q52M75 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01554Q52M75 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC01554Q52M75 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
LINC01554Q52M75 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01554Q52M75 AL449106.1-201ENST00000608517 1980 ntBASIC12.21□□□□□ -0.45
LINC01554Q52M75 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01554Q52M75 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
LINC01554Q52M75 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01554Q52M75 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC12.21□□□□□ -0.46
LINC01554Q52M75 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01554Q52M75 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01554Q52M75 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LINC01554Q52M75 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01554Q52M75 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01554Q52M75 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LINC01554Q52M75 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01554Q52M75 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01554Q52M75 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01554Q52M75 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01554Q52M75 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01554Q52M75 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LINC01554Q52M75 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC12.2□□□□□ -0.46
LINC01554Q52M75 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC01554Q52M75 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01554Q52M75 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LINC01554Q52M75 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LINC01554Q52M75 ABCB10P4-201ENST00000566803 2184 ntBASIC12.19□□□□□ -0.46
LINC01554Q52M75 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01554Q52M75 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01554Q52M75 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC01554Q52M75 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC01554Q52M75 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LINC01554Q52M75 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC01554Q52M75 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01554Q52M75 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01554Q52M75 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC01554Q52M75 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01554Q52M75 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01554Q52M75 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01554Q52M75 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01554Q52M75 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01554Q52M75 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01554Q52M75 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC01554Q52M75 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC01554Q52M75 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01554Q52M75 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01554Q52M75 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LINC01554Q52M75 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01554Q52M75 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01554Q52M75 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01554Q52M75 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01554Q52M75 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01554Q52M75 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01554Q52M75 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
LINC01554Q52M75 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01554Q52M75 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01554Q52M75 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC01554Q52M75 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01554Q52M75 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01554Q52M75 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01554Q52M75 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01554Q52M75 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01554Q52M75 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01554Q52M75 AC006077.2-201ENST00000623591 457 ntBASIC12.16□□□□□ -0.46
LINC01554Q52M75 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01554Q52M75 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LINC01554Q52M75 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms