Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
HIST1H3AP68431 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H3AP68431 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HIST1H3AP68431 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H3AP68431 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H3AP68431 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HIST1H3AP68431 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIST1H3AP68431 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
HIST1H3AP68431 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST1H3AP68431 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HIST1H3AP68431 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HIST1H3AP68431 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST1H3AP68431 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.47■■□□□ 1.03
HIST1H3AP68431 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST1H3AP68431 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.46■■□□□ 1.03
HIST1H3AP68431 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.46■■□□□ 1.03
HIST1H3AP68431 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.46■■□□□ 1.03
HIST1H3AP68431 MIR639-201ENST00000384974 98 ntBASIC21.46■■□□□ 1.03
HIST1H3AP68431 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.46■■□□□ 1.03
HIST1H3AP68431 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.46■■□□□ 1.03
HIST1H3AP68431 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H3AP68431 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
HIST1H3AP68431 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H3AP68431 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HIST1H3AP68431 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.45■■□□□ 1.02
HIST1H3AP68431 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HIST1H3AP68431 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.45■■□□□ 1.02
HIST1H3AP68431 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HIST1H3AP68431 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HIST1H3AP68431 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HIST1H3AP68431 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HIST1H3AP68431 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HIST1H3AP68431 AC145676.1-201ENST00000514988 2004 ntBASIC21.45■■□□□ 1.02
HIST1H3AP68431 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HIST1H3AP68431 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HIST1H3AP68431 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HIST1H3AP68431 AC092803.2-201ENST00000564287 1899 ntBASIC21.44■■□□□ 1.02
HIST1H3AP68431 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.44■■□□□ 1.02
HIST1H3AP68431 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
HIST1H3AP68431 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIST1H3AP68431 AC126177.7-201ENST00000547904 679 ntBASIC21.43■■□□□ 1.02
HIST1H3AP68431 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIST1H3AP68431 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HIST1H3AP68431 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H3AP68431 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H3AP68431 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H3AP68431 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H3AP68431 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H3AP68431 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H3AP68431 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.42■■□□□ 1.02
HIST1H3AP68431 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.42■■□□□ 1.02
HIST1H3AP68431 AL359504.2-201ENST00000605506 1601 ntBASIC21.42■■□□□ 1.02
HIST1H3AP68431 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HIST1H3AP68431 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIST1H3AP68431 DUSP8P4-201ENST00000399538 1761 ntBASIC21.41■■□□□ 1.02
HIST1H3AP68431 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.41■■□□□ 1.02
HIST1H3AP68431 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIST1H3AP68431 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.41■■□□□ 1.02
HIST1H3AP68431 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIST1H3AP68431 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.41■■□□□ 1.02
HIST1H3AP68431 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HIST1H3AP68431 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIST1H3AP68431 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.4■■□□□ 1.02
HIST1H3AP68431 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HIST1H3AP68431 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIST1H3AP68431 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
HIST1H3AP68431 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.39■■□□□ 1.02
HIST1H3AP68431 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HIST1H3AP68431 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
HIST1H3AP68431 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HIST1H3AP68431 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HIST1H3AP68431 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.38■■□□□ 1.01
HIST1H3AP68431 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H3AP68431 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H3AP68431 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H3AP68431 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H3AP68431 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H3AP68431 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H3AP68431 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H3AP68431 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H3AP68431 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIST1H3AP68431 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIST1H3AP68431 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.37■■□□□ 1.01
HIST1H3AP68431 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
HIST1H3AP68431 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HIST1H3AP68431 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H3AP68431 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HIST1H3AP68431 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H3AP68431 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H3AP68431 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H3AP68431 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.36■■□□□ 1.01
HIST1H3AP68431 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST1H3AP68431 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST1H3AP68431 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST1H3AP68431 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
HIST1H3AP68431 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.34■■□□□ 1.01
HIST1H3AP68431 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HIST1H3AP68431 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HIST1H3AP68431 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.34■■□□□ 1.01
HIST1H3AP68431 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms