Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SEC61A1P61619 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SEC61A1P61619 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.22■□□□□ 0.99
SEC61A1P61619 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEC61A1P61619 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEC61A1P61619 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.22■□□□□ 0.99
SEC61A1P61619 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEC61A1P61619 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEC61A1P61619 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEC61A1P61619 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.22■□□□□ 0.99
SEC61A1P61619 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SEC61A1P61619 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.21■□□□□ 0.99
SEC61A1P61619 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SEC61A1P61619 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SEC61A1P61619 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SEC61A1P61619 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SEC61A1P61619 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SEC61A1P61619 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.2■□□□□ 0.99
SEC61A1P61619 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SEC61A1P61619 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SEC61A1P61619 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SEC61A1P61619 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SEC61A1P61619 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SEC61A1P61619 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SEC61A1P61619 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
SEC61A1P61619 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SEC61A1P61619 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SEC61A1P61619 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
SEC61A1P61619 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.19■□□□□ 0.98
SEC61A1P61619 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SEC61A1P61619 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SEC61A1P61619 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SEC61A1P61619 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.19■□□□□ 0.98
SEC61A1P61619 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.18■□□□□ 0.98
SEC61A1P61619 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SEC61A1P61619 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SEC61A1P61619 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SEC61A1P61619 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEC61A1P61619 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.17■□□□□ 0.98
SEC61A1P61619 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SEC61A1P61619 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.17■□□□□ 0.98
SEC61A1P61619 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.17■□□□□ 0.98
SEC61A1P61619 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEC61A1P61619 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEC61A1P61619 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.17■□□□□ 0.98
SEC61A1P61619 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.16■□□□□ 0.98
SEC61A1P61619 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEC61A1P61619 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEC61A1P61619 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SEC61A1P61619 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SEC61A1P61619 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SEC61A1P61619 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SEC61A1P61619 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SEC61A1P61619 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEC61A1P61619 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEC61A1P61619 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEC61A1P61619 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEC61A1P61619 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEC61A1P61619 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SEC61A1P61619 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SEC61A1P61619 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SEC61A1P61619 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SEC61A1P61619 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SEC61A1P61619 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SEC61A1P61619 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SEC61A1P61619 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SEC61A1P61619 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SEC61A1P61619 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
SEC61A1P61619 AC145676.1-201ENST00000514988 2004 ntBASIC21.14■□□□□ 0.98
SEC61A1P61619 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SEC61A1P61619 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SEC61A1P61619 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.14■□□□□ 0.97
SEC61A1P61619 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEC61A1P61619 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.14■□□□□ 0.97
SEC61A1P61619 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SEC61A1P61619 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SEC61A1P61619 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SEC61A1P61619 AP002414.2-202ENST00000590929 1450 ntBASIC21.13■□□□□ 0.97
SEC61A1P61619 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SEC61A1P61619 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEC61A1P61619 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEC61A1P61619 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEC61A1P61619 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.12■□□□□ 0.97
SEC61A1P61619 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.12■□□□□ 0.97
SEC61A1P61619 HSD17B1P1-201ENST00000590052 955 ntBASIC21.12■□□□□ 0.97
SEC61A1P61619 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.12■□□□□ 0.97
SEC61A1P61619 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SEC61A1P61619 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEC61A1P61619 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEC61A1P61619 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SEC61A1P61619 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SEC61A1P61619 AC008813.1-201ENST00000536597 885 ntBASIC21.11■□□□□ 0.97
SEC61A1P61619 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SEC61A1P61619 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEC61A1P61619 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEC61A1P61619 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEC61A1P61619 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEC61A1P61619 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEC61A1P61619 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SEC61A1P61619 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms