Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CKS1BP61024 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CKS1BP61024 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CKS1BP61024 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKS1BP61024 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CKS1BP61024 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CKS1BP61024 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC16.89■□□□□ 0.29
CKS1BP61024 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKS1BP61024 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKS1BP61024 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
CKS1BP61024 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKS1BP61024 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKS1BP61024 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CKS1BP61024 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CKS1BP61024 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKS1BP61024 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.88■□□□□ 0.29
CKS1BP61024 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CKS1BP61024 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKS1BP61024 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC16.88■□□□□ 0.29
CKS1BP61024 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.87■□□□□ 0.29
CKS1BP61024 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 AL024507.2-201ENST00000606070 2574 ntBASIC16.86■□□□□ 0.29
CKS1BP61024 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CKS1BP61024 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CKS1BP61024 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CKS1BP61024 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.86■□□□□ 0.29
CKS1BP61024 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CKS1BP61024 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CKS1BP61024 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CKS1BP61024 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CKS1BP61024 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 AP002414.2-202ENST00000590929 1450 ntBASIC16.85■□□□□ 0.29
CKS1BP61024 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CKS1BP61024 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CKS1BP61024 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CKS1BP61024 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CKS1BP61024 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CKS1BP61024 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CKS1BP61024 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.84■□□□□ 0.29
CKS1BP61024 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CKS1BP61024 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC16.84■□□□□ 0.29
CKS1BP61024 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CKS1BP61024 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CKS1BP61024 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CKS1BP61024 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CKS1BP61024 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CKS1BP61024 RPS2-209ENST00000529806 993 ntTSL 3 BASIC16.83■□□□□ 0.28
CKS1BP61024 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CKS1BP61024 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKS1BP61024 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC16.82■□□□□ 0.28
CKS1BP61024 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKS1BP61024 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC16.82■□□□□ 0.28
CKS1BP61024 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.82■□□□□ 0.28
CKS1BP61024 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKS1BP61024 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC16.82■□□□□ 0.28
CKS1BP61024 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS1BP61024 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS1BP61024 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS1BP61024 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC16.81■□□□□ 0.28
CKS1BP61024 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS1BP61024 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS1BP61024 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CKS1BP61024 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKS1BP61024 AC097358.2-201ENST00000607541 1159 ntBASIC16.8■□□□□ 0.28
CKS1BP61024 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKS1BP61024 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.8■□□□□ 0.28
CKS1BP61024 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKS1BP61024 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKS1BP61024 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CKS1BP61024 MEST-211ENST00000437945 1455 ntTSL 5 BASIC16.79■□□□□ 0.28
CKS1BP61024 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC16.79■□□□□ 0.28
CKS1BP61024 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.79■□□□□ 0.28
CKS1BP61024 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CKS1BP61024 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKS1BP61024 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CKS1BP61024 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKS1BP61024 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC16.78■□□□□ 0.28
CKS1BP61024 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKS1BP61024 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CKS1BP61024 CAHM-201ENST00000604200 896 ntBASIC16.78■□□□□ 0.28
CKS1BP61024 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.78■□□□□ 0.28
CKS1BP61024 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms