Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3S2P59780 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
AP3S2P59780 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3S2P59780 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3S2P59780 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3S2P59780 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3S2P59780 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3S2P59780 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3S2P59780 AC142472.1-201ENST00000612013 1741 ntBASIC20.95■□□□□ 0.94
AP3S2P59780 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3S2P59780 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP3S2P59780 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3S2P59780 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3S2P59780 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.95■□□□□ 0.94
AP3S2P59780 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP3S2P59780 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3S2P59780 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.95■□□□□ 0.94
AP3S2P59780 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.94■□□□□ 0.94
AP3S2P59780 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3S2P59780 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.94■□□□□ 0.94
AP3S2P59780 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3S2P59780 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3S2P59780 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3S2P59780 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3S2P59780 AC012676.1-201ENST00000574705 1949 ntBASIC20.94■□□□□ 0.94
AP3S2P59780 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.94■□□□□ 0.94
AP3S2P59780 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.94■□□□□ 0.94
AP3S2P59780 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.93■□□□□ 0.94
AP3S2P59780 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
AP3S2P59780 AL139125.2-201ENST00000623134 1869 ntBASIC20.93■□□□□ 0.94
AP3S2P59780 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.93■□□□□ 0.94
AP3S2P59780 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3S2P59780 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
AP3S2P59780 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
AP3S2P59780 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3S2P59780 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
AP3S2P59780 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3S2P59780 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.92■□□□□ 0.94
AP3S2P59780 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
AP3S2P59780 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3S2P59780 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3S2P59780 AC135983.2-203ENST00000454486 1613 ntBASIC20.91■□□□□ 0.94
AP3S2P59780 AC010501.1-201ENST00000606270 1962 ntBASIC20.91■□□□□ 0.94
AP3S2P59780 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3S2P59780 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3S2P59780 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.9■□□□□ 0.94
AP3S2P59780 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3S2P59780 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
AP3S2P59780 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
AP3S2P59780 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3S2P59780 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AP3S2P59780 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AP3S2P59780 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
AP3S2P59780 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
AP3S2P59780 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
AP3S2P59780 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.88■□□□□ 0.93
AP3S2P59780 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.88■□□□□ 0.93
AP3S2P59780 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3S2P59780 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3S2P59780 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.88■□□□□ 0.93
AP3S2P59780 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3S2P59780 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.87■□□□□ 0.93
AP3S2P59780 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S2P59780 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
AP3S2P59780 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S2P59780 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S2P59780 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S2P59780 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S2P59780 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3S2P59780 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S2P59780 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S2P59780 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S2P59780 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S2P59780 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
AP3S2P59780 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S2P59780 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S2P59780 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S2P59780 AC022211.4-201ENST00000625094 2161 ntBASIC20.86■□□□□ 0.93
AP3S2P59780 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S2P59780 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S2P59780 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S2P59780 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.85■□□□□ 0.93
AP3S2P59780 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.85■□□□□ 0.93
AP3S2P59780 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3S2P59780 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3S2P59780 AC138932.3-201ENST00000567634 1902 ntBASIC20.84■□□□□ 0.93
AP3S2P59780 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP3S2P59780 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
AP3S2P59780 AC133561.1-201ENST00000568600 2415 ntBASIC20.84■□□□□ 0.93
AP3S2P59780 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
AP3S2P59780 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3S2P59780 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
AP3S2P59780 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP3S2P59780 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP3S2P59780 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.83■□□□□ 0.93
AP3S2P59780 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
AP3S2P59780 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP3S2P59780 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP3S2P59780 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3S2P59780 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms