Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CMC4P56277 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CMC4P56277 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CMC4P56277 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CMC4P56277 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CMC4P56277 AL359504.2-201ENST00000605506 1601 ntBASIC18.28■□□□□ 0.52
CMC4P56277 RARRES2P2-201ENST00000394842 485 ntBASIC18.28■□□□□ 0.52
CMC4P56277 AL157400.5-201ENST00000507624 621 ntBASIC18.28■□□□□ 0.52
CMC4P56277 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.28■□□□□ 0.52
CMC4P56277 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.28■□□□□ 0.52
CMC4P56277 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CMC4P56277 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CMC4P56277 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.27■□□□□ 0.52
CMC4P56277 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CMC4P56277 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CMC4P56277 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CMC4P56277 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CMC4P56277 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.26■□□□□ 0.51
CMC4P56277 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CMC4P56277 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CMC4P56277 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CMC4P56277 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CMC4P56277 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CMC4P56277 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CMC4P56277 RP9P-202ENST00000450133 1212 ntBASIC18.25■□□□□ 0.51
CMC4P56277 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CMC4P56277 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CMC4P56277 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CMC4P56277 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CMC4P56277 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CMC4P56277 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CMC4P56277 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CMC4P56277 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CMC4P56277 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CMC4P56277 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.24■□□□□ 0.51
CMC4P56277 AC007029.1-201ENST00000604183 313 ntBASIC18.24■□□□□ 0.51
CMC4P56277 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CMC4P56277 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CMC4P56277 AP004609.3-201ENST00000610705 1884 ntBASIC18.23■□□□□ 0.51
CMC4P56277 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.23■□□□□ 0.51
CMC4P56277 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CMC4P56277 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CMC4P56277 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CMC4P56277 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.22■□□□□ 0.51
CMC4P56277 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CMC4P56277 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CMC4P56277 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CMC4P56277 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.21■□□□□ 0.51
CMC4P56277 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CMC4P56277 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CMC4P56277 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CMC4P56277 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.21■□□□□ 0.51
CMC4P56277 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CMC4P56277 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.21■□□□□ 0.51
CMC4P56277 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CMC4P56277 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CMC4P56277 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CMC4P56277 ABHD17AP5-201ENST00000580133 923 ntBASIC18.2■□□□□ 0.5
CMC4P56277 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CMC4P56277 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CMC4P56277 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CMC4P56277 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CMC4P56277 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CMC4P56277 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CMC4P56277 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
CMC4P56277 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CMC4P56277 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CMC4P56277 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.18■□□□□ 0.5
CMC4P56277 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.18■□□□□ 0.5
CMC4P56277 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.18■□□□□ 0.5
CMC4P56277 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CMC4P56277 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.18■□□□□ 0.5
CMC4P56277 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CMC4P56277 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CMC4P56277 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CMC4P56277 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CMC4P56277 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CMC4P56277 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.17■□□□□ 0.5
CMC4P56277 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CMC4P56277 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CMC4P56277 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CMC4P56277 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.17■□□□□ 0.5
CMC4P56277 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CMC4P56277 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.17■□□□□ 0.5
CMC4P56277 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CMC4P56277 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CMC4P56277 KRT18P10-201ENST00000388836 1287 ntBASIC18.16■□□□□ 0.5
CMC4P56277 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CMC4P56277 AC093536.1-201ENST00000569153 554 ntBASIC18.16■□□□□ 0.5
CMC4P56277 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.16■□□□□ 0.5
CMC4P56277 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CMC4P56277 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.16■□□□□ 0.5
CMC4P56277 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CMC4P56277 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.15■□□□□ 0.5
CMC4P56277 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CMC4P56277 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CMC4P56277 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CMC4P56277 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.15■□□□□ 0.5
CMC4P56277 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.15■□□□□ 0.5
CMC4P56277 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 686.4 ms