Protein–RNA interactions for Protein: P56182

RRP1, Ribosomal RNA processing protein 1 homolog A, humanhuman

Known RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1P56182 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.62■■■□□ 2.65
RRP1P56182 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.62■■■□□ 2.65
RRP1P56182 AC010501.1-201ENST00000606270 1962 ntBASIC31.61■■■□□ 2.65
RRP1P56182 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.61■■■□□ 2.65
RRP1P56182 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
RRP1P56182 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
RRP1P56182 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
RRP1P56182 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.61■■■□□ 2.65
RRP1P56182 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.6■■■□□ 2.65
RRP1P56182 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.6■■■□□ 2.65
RRP1P56182 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.6■■■□□ 2.65
RRP1P56182 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RRP1P56182 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RRP1P56182 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
RRP1P56182 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RRP1P56182 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RRP1P56182 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RRP1P56182 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
RRP1P56182 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.58■■■□□ 2.65
RRP1P56182 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RRP1P56182 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RRP1P56182 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
RRP1P56182 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.57■■■□□ 2.64
RRP1P56182 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
RRP1P56182 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RRP1P56182 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.56■■■□□ 2.64
RRP1P56182 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
RRP1P56182 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
RRP1P56182 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
RRP1P56182 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.56■■■□□ 2.64
RRP1P56182 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RRP1P56182 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
RRP1P56182 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
RRP1P56182 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
RRP1P56182 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
RRP1P56182 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
RRP1P56182 LINC01971-201ENST00000617888 1048 ntBASIC31.53■■■□□ 2.64
RRP1P56182 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.53■■■□□ 2.64
RRP1P56182 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
RRP1P56182 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
RRP1P56182 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RRP1P56182 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
RRP1P56182 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
RRP1P56182 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RRP1P56182 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RRP1P56182 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC31.51■■■□□ 2.63
RRP1P56182 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.5■■■□□ 2.63
RRP1P56182 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.5■■■□□ 2.63
RRP1P56182 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RRP1P56182 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RRP1P56182 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
RRP1P56182 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
RRP1P56182 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
RRP1P56182 SNAI3-AS1-204ENST00000567997 2048 ntBASIC31.49■■■□□ 2.63
RRP1P56182 DUX4L13-201ENST00000554103 1267 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L15-201ENST00000611059 1267 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L23-201ENST00000615195 1269 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L24-201ENST00000617576 1269 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L22-201ENST00000618238 1269 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L20-201ENST00000619712 1269 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L21-201ENST00000622058 1269 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L10-201ENST00000622460 1267 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L25-201ENST00000624915 1269 ntBASIC31.48■■■□□ 2.63
RRP1P56182 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
RRP1P56182 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC31.48■■■□□ 2.63
RRP1P56182 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
RRP1P56182 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
RRP1P56182 AC093323.1-202ENST00000635031 2045 ntBASIC31.47■■■□□ 2.63
RRP1P56182 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RRP1P56182 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RRP1P56182 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RRP1P56182 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.45■■■□□ 2.63
RRP1P56182 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
RRP1P56182 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
RRP1P56182 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
RRP1P56182 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
RRP1P56182 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC31.44■■■□□ 2.62
RRP1P56182 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
RRP1P56182 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RRP1P56182 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RRP1P56182 MIR219A2-201ENST00000608502 1504 ntBASIC31.44■■■□□ 2.62
RRP1P56182 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.43■■■□□ 2.62
RRP1P56182 RPS2P35-201ENST00000443417 897 ntBASIC31.43■■■□□ 2.62
RRP1P56182 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.43■■■□□ 2.62
RRP1P56182 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.43■■■□□ 2.62
RRP1P56182 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC31.43■■■□□ 2.62
RRP1P56182 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RRP1P56182 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RRP1P56182 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
RRP1P56182 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RRP1P56182 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.42■■■□□ 2.62
RRP1P56182 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RRP1P56182 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.41■■■□□ 2.62
RRP1P56182 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RRP1P56182 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
RRP1P56182 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
RRP1P56182 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RRP1P56182 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
RRP1P56182 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RRP1P56182 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms