Protein–RNA interactions for Protein: P56182

RRP1, Ribosomal RNA processing protein 1 homolog A, humanhuman

Known RBP Predictions only

Length 461 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1P56182 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.62■■■□□ 2.65
RRP1P56182 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.62■■■□□ 2.65
RRP1P56182 AC010501.1-201ENST00000606270 1962 ntBASIC31.61■■■□□ 2.65
RRP1P56182 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.61■■■□□ 2.65
RRP1P56182 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
RRP1P56182 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
RRP1P56182 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
RRP1P56182 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.61■■■□□ 2.65
RRP1P56182 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.6■■■□□ 2.65
RRP1P56182 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.6■■■□□ 2.65
RRP1P56182 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.6■■■□□ 2.65
RRP1P56182 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RRP1P56182 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RRP1P56182 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
RRP1P56182 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RRP1P56182 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RRP1P56182 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RRP1P56182 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
RRP1P56182 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.58■■■□□ 2.65
RRP1P56182 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RRP1P56182 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RRP1P56182 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
RRP1P56182 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.57■■■□□ 2.64
RRP1P56182 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
RRP1P56182 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RRP1P56182 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.56■■■□□ 2.64
RRP1P56182 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
RRP1P56182 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
RRP1P56182 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
RRP1P56182 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.56■■■□□ 2.64
RRP1P56182 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RRP1P56182 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
RRP1P56182 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
RRP1P56182 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
RRP1P56182 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
RRP1P56182 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
RRP1P56182 LINC01971-201ENST00000617888 1048 ntBASIC31.53■■■□□ 2.64
RRP1P56182 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.53■■■□□ 2.64
RRP1P56182 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
RRP1P56182 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
RRP1P56182 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RRP1P56182 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
RRP1P56182 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
RRP1P56182 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RRP1P56182 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RRP1P56182 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC31.51■■■□□ 2.63
RRP1P56182 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.5■■■□□ 2.63
RRP1P56182 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.5■■■□□ 2.63
RRP1P56182 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RRP1P56182 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RRP1P56182 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
RRP1P56182 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
RRP1P56182 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
RRP1P56182 SNAI3-AS1-204ENST00000567997 2048 ntBASIC31.49■■■□□ 2.63
RRP1P56182 DUX4L13-201ENST00000554103 1267 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L15-201ENST00000611059 1267 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L23-201ENST00000615195 1269 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L24-201ENST00000617576 1269 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L22-201ENST00000618238 1269 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L20-201ENST00000619712 1269 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L21-201ENST00000622058 1269 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L10-201ENST00000622460 1267 ntBASIC31.48■■■□□ 2.63
RRP1P56182 DUX4L25-201ENST00000624915 1269 ntBASIC31.48■■■□□ 2.63
RRP1P56182 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
RRP1P56182 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC31.48■■■□□ 2.63
RRP1P56182 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
RRP1P56182 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
RRP1P56182 AC093323.1-202ENST00000635031 2045 ntBASIC31.47■■■□□ 2.63
RRP1P56182 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RRP1P56182 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RRP1P56182 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RRP1P56182 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.45■■■□□ 2.63
RRP1P56182 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
RRP1P56182 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
RRP1P56182 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
RRP1P56182 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
RRP1P56182 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC31.44■■■□□ 2.62
RRP1P56182 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
RRP1P56182 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RRP1P56182 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RRP1P56182 MIR219A2-201ENST00000608502 1504 ntBASIC31.44■■■□□ 2.62
RRP1P56182 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.43■■■□□ 2.62
RRP1P56182 RPS2P35-201ENST00000443417 897 ntBASIC31.43■■■□□ 2.62
RRP1P56182 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.43■■■□□ 2.62
RRP1P56182 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.43■■■□□ 2.62
RRP1P56182 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC31.43■■■□□ 2.62
RRP1P56182 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RRP1P56182 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RRP1P56182 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
RRP1P56182 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RRP1P56182 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.42■■■□□ 2.62
RRP1P56182 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RRP1P56182 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.41■■■□□ 2.62
RRP1P56182 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RRP1P56182 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
RRP1P56182 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
RRP1P56182 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RRP1P56182 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
RRP1P56182 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RRP1P56182 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms