Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRIM2P49643 CR559946.2-201ENST00000623684 991 ntBASIC23.15■■□□□ 1.3
PRIM2P49643 AC148477.6-201ENST00000623746 465 ntBASIC23.15■■□□□ 1.3
PRIM2P49643 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRIM2P49643 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
PRIM2P49643 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PRIM2P49643 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PRIM2P49643 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.14■■□□□ 1.29
PRIM2P49643 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.14■■□□□ 1.29
PRIM2P49643 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRIM2P49643 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRIM2P49643 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRIM2P49643 MIR7108-201ENST00000614319 87 ntBASIC23.13■■□□□ 1.29
PRIM2P49643 AC142472.1-201ENST00000612013 1741 ntBASIC23.13■■□□□ 1.29
PRIM2P49643 AC092803.2-201ENST00000564287 1899 ntBASIC23.13■■□□□ 1.29
PRIM2P49643 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.13■■□□□ 1.29
PRIM2P49643 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRIM2P49643 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRIM2P49643 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRIM2P49643 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.12■■□□□ 1.29
PRIM2P49643 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.12■■□□□ 1.29
PRIM2P49643 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.11■■□□□ 1.29
PRIM2P49643 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.11■■□□□ 1.29
PRIM2P49643 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRIM2P49643 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRIM2P49643 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
PRIM2P49643 MIR3648-2-201ENST00000581792 180 ntBASIC23.11■■□□□ 1.29
PRIM2P49643 MIR3648-1-201ENST00000615959 180 ntBASIC23.11■■□□□ 1.29
PRIM2P49643 MIR219A2-201ENST00000608502 1504 ntBASIC23.11■■□□□ 1.29
PRIM2P49643 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.11■■□□□ 1.29
PRIM2P49643 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PRIM2P49643 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PRIM2P49643 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PRIM2P49643 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.1■■□□□ 1.29
PRIM2P49643 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRIM2P49643 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRIM2P49643 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.1■■□□□ 1.29
PRIM2P49643 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRIM2P49643 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PRIM2P49643 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRIM2P49643 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.09■■□□□ 1.29
PRIM2P49643 HLA-V-202ENST00000446817 847 ntBASIC23.09■■□□□ 1.29
PRIM2P49643 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRIM2P49643 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PRIM2P49643 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.09■■□□□ 1.29
PRIM2P49643 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRIM2P49643 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRIM2P49643 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRIM2P49643 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PRIM2P49643 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRIM2P49643 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PRIM2P49643 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PRIM2P49643 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PRIM2P49643 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PRIM2P49643 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PRIM2P49643 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PRIM2P49643 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PRIM2P49643 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PRIM2P49643 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.06■■□□□ 1.28
PRIM2P49643 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.06■■□□□ 1.28
PRIM2P49643 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PRIM2P49643 DUSP8P4-201ENST00000399538 1761 ntBASIC23.06■■□□□ 1.28
PRIM2P49643 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PRIM2P49643 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PRIM2P49643 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PRIM2P49643 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PRIM2P49643 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PRIM2P49643 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PRIM2P49643 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PRIM2P49643 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.05■■□□□ 1.28
PRIM2P49643 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.05■■□□□ 1.28
PRIM2P49643 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.05■■□□□ 1.28
PRIM2P49643 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.05■■□□□ 1.28
PRIM2P49643 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PRIM2P49643 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PRIM2P49643 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PRIM2P49643 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.04■■□□□ 1.28
PRIM2P49643 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.04■■□□□ 1.28
PRIM2P49643 AC016575.1-201ENST00000607026 382 ntBASIC23.04■■□□□ 1.28
PRIM2P49643 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PRIM2P49643 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.04■■□□□ 1.28
PRIM2P49643 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PRIM2P49643 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.04■■□□□ 1.28
PRIM2P49643 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PRIM2P49643 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.03■■□□□ 1.28
PRIM2P49643 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
PRIM2P49643 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.02■■□□□ 1.28
PRIM2P49643 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.02■■□□□ 1.28
PRIM2P49643 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRIM2P49643 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PRIM2P49643 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRIM2P49643 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRIM2P49643 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PRIM2P49643 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
PRIM2P49643 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRIM2P49643 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PRIM2P49643 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PRIM2P49643 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRIM2P49643 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PRIM2P49643 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms