Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHATP28329 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHATP28329 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.76■□□□□ 0.91
CHATP28329 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.76■□□□□ 0.91
CHATP28329 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.76■□□□□ 0.91
CHATP28329 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHATP28329 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHATP28329 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHATP28329 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.75■□□□□ 0.91
CHATP28329 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHATP28329 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CHATP28329 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHATP28329 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHATP28329 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CHATP28329 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHATP28329 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHATP28329 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHATP28329 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CHATP28329 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHATP28329 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHATP28329 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHATP28329 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHATP28329 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.74■□□□□ 0.91
CHATP28329 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHATP28329 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.73■□□□□ 0.91
CHATP28329 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHATP28329 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHATP28329 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHATP28329 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CHATP28329 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.71■□□□□ 0.91
CHATP28329 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHATP28329 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHATP28329 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CHATP28329 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CHATP28329 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHATP28329 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.7■□□□□ 0.9
CHATP28329 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.7■□□□□ 0.9
CHATP28329 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CHATP28329 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHATP28329 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHATP28329 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHATP28329 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHATP28329 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.69■□□□□ 0.9
CHATP28329 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.69■□□□□ 0.9
CHATP28329 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHATP28329 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHATP28329 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHATP28329 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHATP28329 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CHATP28329 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHATP28329 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHATP28329 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHATP28329 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHATP28329 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHATP28329 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHATP28329 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CHATP28329 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHATP28329 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHATP28329 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.67■□□□□ 0.9
CHATP28329 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.67■□□□□ 0.9
CHATP28329 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.66■□□□□ 0.9
CHATP28329 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHATP28329 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.66■□□□□ 0.9
CHATP28329 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHATP28329 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.66■□□□□ 0.9
CHATP28329 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHATP28329 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHATP28329 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.65■□□□□ 0.9
CHATP28329 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHATP28329 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHATP28329 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.64■□□□□ 0.9
CHATP28329 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHATP28329 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHATP28329 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHATP28329 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CHATP28329 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.64■□□□□ 0.89
CHATP28329 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHATP28329 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHATP28329 AC010501.1-201ENST00000606270 1962 ntBASIC20.63■□□□□ 0.89
CHATP28329 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHATP28329 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.63■□□□□ 0.89
CHATP28329 LINC01971-201ENST00000617888 1048 ntBASIC20.63■□□□□ 0.89
CHATP28329 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHATP28329 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHATP28329 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHATP28329 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHATP28329 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.63■□□□□ 0.89
CHATP28329 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHATP28329 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHATP28329 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHATP28329 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHATP28329 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.62■□□□□ 0.89
CHATP28329 ERN1-208ENST00000606895 2068 ntBASIC20.62■□□□□ 0.89
CHATP28329 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHATP28329 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHATP28329 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHATP28329 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHATP28329 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CHATP28329 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHATP28329 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms