Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.79■■■□□ 2.2
NCLP19338 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
NCLP19338 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC28.79■■■□□ 2.2
NCLP19338 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC28.79■■■□□ 2.2
NCLP19338 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
NCLP19338 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC28.79■■■□□ 2.2
NCLP19338 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
NCLP19338 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
NCLP19338 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
NCLP19338 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
NCLP19338 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.78■■■□□ 2.2
NCLP19338 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.77■■■□□ 2.2
NCLP19338 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
NCLP19338 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
NCLP19338 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
NCLP19338 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
NCLP19338 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.76■■■□□ 2.19
NCLP19338 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.75■■■□□ 2.19
NCLP19338 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.75■■■□□ 2.19
NCLP19338 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
NCLP19338 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
NCLP19338 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
NCLP19338 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.73■■■□□ 2.19
NCLP19338 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.73■■■□□ 2.19
NCLP19338 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.19
NCLP19338 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.73■■■□□ 2.19
NCLP19338 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
NCLP19338 HLA-V-202ENST00000446817 847 ntBASIC28.72■■■□□ 2.19
NCLP19338 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
NCLP19338 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
NCLP19338 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
NCLP19338 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.71■■■□□ 2.19
NCLP19338 AC092803.2-201ENST00000564287 1899 ntBASIC28.71■■■□□ 2.19
NCLP19338 AP004609.3-201ENST00000610705 1884 ntBASIC28.71■■■□□ 2.19
NCLP19338 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC28.71■■■□□ 2.19
NCLP19338 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
NCLP19338 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.7■■■□□ 2.18
NCLP19338 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.7■■■□□ 2.18
NCLP19338 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
NCLP19338 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.69■■■□□ 2.18
NCLP19338 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
NCLP19338 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
NCLP19338 AC093323.1-202ENST00000635031 2045 ntBASIC28.69■■■□□ 2.18
NCLP19338 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
NCLP19338 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
NCLP19338 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
NCLP19338 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC28.68■■■□□ 2.18
NCLP19338 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
NCLP19338 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
NCLP19338 DUSP8P4-201ENST00000399538 1761 ntBASIC28.67■■■□□ 2.18
NCLP19338 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.67■■■□□ 2.18
NCLP19338 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
NCLP19338 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
NCLP19338 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
NCLP19338 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.65■■■□□ 2.18
NCLP19338 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.65■■■□□ 2.18
NCLP19338 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
NCLP19338 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
NCLP19338 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
NCLP19338 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
NCLP19338 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.64■■■□□ 2.18
NCLP19338 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.64■■■□□ 2.18
NCLP19338 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NCLP19338 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NCLP19338 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
NCLP19338 AC110285.7-201ENST00000624417 1536 ntBASIC28.63■■■□□ 2.17
NCLP19338 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
NCLP19338 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.62■■■□□ 2.17
NCLP19338 LINC01971-201ENST00000617888 1048 ntBASIC28.62■■■□□ 2.17
NCLP19338 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
NCLP19338 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC28.62■■■□□ 2.17
NCLP19338 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
NCLP19338 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
NCLP19338 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.61■■■□□ 2.17
NCLP19338 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
NCLP19338 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.61■■■□□ 2.17
NCLP19338 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.61■■■□□ 2.17
NCLP19338 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
NCLP19338 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
NCLP19338 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
NCLP19338 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.59■■■□□ 2.17
NCLP19338 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NCLP19338 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NCLP19338 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NCLP19338 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
NCLP19338 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.58■■■□□ 2.17
NCLP19338 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
NCLP19338 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.57■■■□□ 2.16
NCLP19338 DUX4L11-201ENST00000611504 1267 ntBASIC28.57■■■□□ 2.16
NCLP19338 DUX4L12-201ENST00000614593 1267 ntBASIC28.57■■■□□ 2.16
NCLP19338 DUX4L14-201ENST00000621227 1267 ntBASIC28.57■■■□□ 2.16
NCLP19338 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
NCLP19338 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
NCLP19338 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
NCLP19338 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.56■■■□□ 2.16
NCLP19338 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
NCLP19338 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
NCLP19338 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.55■■■□□ 2.16
NCLP19338 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.55■■■□□ 2.16
NCLP19338 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms