Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC33.04■■■□□ 2.88
CSB-PGBD3P0DP91 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CSB-PGBD3P0DP91 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
CSB-PGBD3P0DP91 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
CSB-PGBD3P0DP91 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
CSB-PGBD3P0DP91 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CSB-PGBD3P0DP91 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC33.02■■■□□ 2.88
CSB-PGBD3P0DP91 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CSB-PGBD3P0DP91 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
CSB-PGBD3P0DP91 IDNK-201ENST00000376417 511 ntTSL 5 BASIC33.02■■■□□ 2.88
CSB-PGBD3P0DP91 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CSB-PGBD3P0DP91 AC103724.3-201ENST00000564481 992 ntBASIC33.01■■■□□ 2.87
CSB-PGBD3P0DP91 AL031848.2-201ENST00000607670 837 ntBASIC33.01■■■□□ 2.87
CSB-PGBD3P0DP91 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
CSB-PGBD3P0DP91 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC33■■■□□ 2.87
CSB-PGBD3P0DP91 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC33■■■□□ 2.87
CSB-PGBD3P0DP91 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC33■■■□□ 2.87
CSB-PGBD3P0DP91 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CSB-PGBD3P0DP91 AC019069.1-201ENST00000610008 1333 ntBASIC33■■■□□ 2.87
CSB-PGBD3P0DP91 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
CSB-PGBD3P0DP91 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CSB-PGBD3P0DP91 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
CSB-PGBD3P0DP91 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC32.99■■■□□ 2.87
CSB-PGBD3P0DP91 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC32.98■■■□□ 2.87
CSB-PGBD3P0DP91 PRTG-204ENST00000561292 833 ntTSL 3 BASIC32.98■■■□□ 2.87
CSB-PGBD3P0DP91 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CSB-PGBD3P0DP91 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC32.98■■■□□ 2.87
CSB-PGBD3P0DP91 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
CSB-PGBD3P0DP91 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CSB-PGBD3P0DP91 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC32.97■■■□□ 2.87
CSB-PGBD3P0DP91 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CSB-PGBD3P0DP91 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC32.97■■■□□ 2.87
CSB-PGBD3P0DP91 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC32.96■■■□□ 2.87
CSB-PGBD3P0DP91 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
CSB-PGBD3P0DP91 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC32.95■■■□□ 2.87
CSB-PGBD3P0DP91 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CSB-PGBD3P0DP91 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CSB-PGBD3P0DP91 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC32.95■■■□□ 2.87
CSB-PGBD3P0DP91 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
CSB-PGBD3P0DP91 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC32.95■■■□□ 2.87
CSB-PGBD3P0DP91 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC32.95■■■□□ 2.86
CSB-PGBD3P0DP91 MTX2-204ENST00000443241 799 ntTSL 3 BASIC32.94■■■□□ 2.86
CSB-PGBD3P0DP91 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC32.94■■■□□ 2.86
CSB-PGBD3P0DP91 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CSB-PGBD3P0DP91 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
CSB-PGBD3P0DP91 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CSB-PGBD3P0DP91 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC32.93■■■□□ 2.86
CSB-PGBD3P0DP91 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
CSB-PGBD3P0DP91 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CSB-PGBD3P0DP91 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
CSB-PGBD3P0DP91 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC32.91■■■□□ 2.86
CSB-PGBD3P0DP91 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
CSB-PGBD3P0DP91 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
CSB-PGBD3P0DP91 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
CSB-PGBD3P0DP91 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CSB-PGBD3P0DP91 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
CSB-PGBD3P0DP91 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
CSB-PGBD3P0DP91 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CSB-PGBD3P0DP91 AL356441.2-201ENST00000443009 864 ntBASIC32.89■■■□□ 2.86
CSB-PGBD3P0DP91 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CSB-PGBD3P0DP91 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CSB-PGBD3P0DP91 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
CSB-PGBD3P0DP91 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC32.88■■■□□ 2.85
CSB-PGBD3P0DP91 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC32.86■■■□□ 2.85
CSB-PGBD3P0DP91 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC32.86■■■□□ 2.85
CSB-PGBD3P0DP91 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CSB-PGBD3P0DP91 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC32.86■■■□□ 2.85
CSB-PGBD3P0DP91 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
CSB-PGBD3P0DP91 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC32.86■■■□□ 2.85
CSB-PGBD3P0DP91 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC32.85■■■□□ 2.85
CSB-PGBD3P0DP91 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC32.85■■■□□ 2.85
CSB-PGBD3P0DP91 WHAMMP3-201ENST00000611636 1609 ntBASIC32.84■■■□□ 2.85
CSB-PGBD3P0DP91 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC32.84■■■□□ 2.85
CSB-PGBD3P0DP91 RNF146-205ENST00000477776 762 ntTSL 3 BASIC32.84■■■□□ 2.85
CSB-PGBD3P0DP91 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC32.84■■■□□ 2.85
CSB-PGBD3P0DP91 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC32.84■■■□□ 2.85
CSB-PGBD3P0DP91 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CSB-PGBD3P0DP91 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CSB-PGBD3P0DP91 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
CSB-PGBD3P0DP91 AC239859.2-201ENST00000444165 318 ntBASIC32.83■■■□□ 2.85
CSB-PGBD3P0DP91 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC32.82■■■□□ 2.85
CSB-PGBD3P0DP91 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CSB-PGBD3P0DP91 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CSB-PGBD3P0DP91 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CSB-PGBD3P0DP91 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC32.82■■■□□ 2.84
CSB-PGBD3P0DP91 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CSB-PGBD3P0DP91 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC32.82■■■□□ 2.84
CSB-PGBD3P0DP91 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
CSB-PGBD3P0DP91 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CSB-PGBD3P0DP91 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
CSB-PGBD3P0DP91 AC019171.1-201ENST00000601251 1056 ntBASIC32.8■■■□□ 2.84
CSB-PGBD3P0DP91 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC32.8■■■□□ 2.84
CSB-PGBD3P0DP91 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CSB-PGBD3P0DP91 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
CSB-PGBD3P0DP91 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC32.79■■■□□ 2.84
CSB-PGBD3P0DP91 AC087393.1-201ENST00000582896 145 ntBASIC32.79■■■□□ 2.84
CSB-PGBD3P0DP91 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC32.79■■■□□ 2.84
CSB-PGBD3P0DP91 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CSB-PGBD3P0DP91 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CSB-PGBD3P0DP91 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC32.78■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms