Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RETP07949 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RETP07949 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RETP07949 MIR4508-201ENST00000584178 70 ntBASIC24.87■■□□□ 1.57
RETP07949 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
RETP07949 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
RETP07949 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
RETP07949 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RETP07949 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.86■■□□□ 1.57
RETP07949 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
RETP07949 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RETP07949 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RETP07949 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RETP07949 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.86■■□□□ 1.57
RETP07949 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
RETP07949 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RETP07949 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
RETP07949 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.85■■□□□ 1.57
RETP07949 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.85■■□□□ 1.57
RETP07949 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RETP07949 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
RETP07949 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.85■■□□□ 1.57
RETP07949 PVT1_1.1-201ENST00000615125 194 ntBASIC24.85■■□□□ 1.57
RETP07949 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.85■■□□□ 1.57
RETP07949 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.85■■□□□ 1.57
RETP07949 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
RETP07949 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
RETP07949 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
RETP07949 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RETP07949 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.83■■□□□ 1.57
RETP07949 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RETP07949 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.57
RETP07949 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RETP07949 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RETP07949 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.83■■□□□ 1.57
RETP07949 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RETP07949 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RETP07949 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
RETP07949 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RETP07949 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RETP07949 AC018755.3-202ENST00000596210 929 ntBASIC24.82■■□□□ 1.56
RETP07949 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RETP07949 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RETP07949 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RETP07949 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RETP07949 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RETP07949 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.81■■□□□ 1.56
RETP07949 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.8■■□□□ 1.56
RETP07949 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.8■■□□□ 1.56
RETP07949 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RETP07949 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RETP07949 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RETP07949 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
RETP07949 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.8■■□□□ 1.56
RETP07949 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.8■■□□□ 1.56
RETP07949 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.8■■□□□ 1.56
RETP07949 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RETP07949 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.79■■□□□ 1.56
RETP07949 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.79■■□□□ 1.56
RETP07949 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.79■■□□□ 1.56
RETP07949 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.79■■□□□ 1.56
RETP07949 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.79■■□□□ 1.56
RETP07949 AL031848.2-201ENST00000607670 837 ntBASIC24.79■■□□□ 1.56
RETP07949 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
RETP07949 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.79■■□□□ 1.56
RETP07949 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
RETP07949 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
RETP07949 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.78■■□□□ 1.56
RETP07949 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
RETP07949 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.78■■□□□ 1.56
RETP07949 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
RETP07949 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.78■■□□□ 1.56
RETP07949 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.78■■□□□ 1.56
RETP07949 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
RETP07949 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RETP07949 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.77■■□□□ 1.56
RETP07949 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.77■■□□□ 1.56
RETP07949 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RETP07949 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
RETP07949 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RETP07949 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RETP07949 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.76■■□□□ 1.55
RETP07949 MIR3960-201ENST00000583311 91 ntBASIC24.76■■□□□ 1.55
RETP07949 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.76■■□□□ 1.55
RETP07949 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RETP07949 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RETP07949 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.75■■□□□ 1.55
RETP07949 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RETP07949 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.75■■□□□ 1.55
RETP07949 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.75■■□□□ 1.55
RETP07949 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RETP07949 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
RETP07949 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.75■■□□□ 1.55
RETP07949 AC103724.3-201ENST00000564481 992 ntBASIC24.75■■□□□ 1.55
RETP07949 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RETP07949 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RETP07949 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
RETP07949 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.74■■□□□ 1.55
RETP07949 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
RETP07949 AC008406.3-201ENST00000620001 1374 ntBASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms