Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 DUX4L23-201ENST00000615195 1269 ntBASIC24.83■■□□□ 1.57
MT-ND3P03897 DUX4L24-201ENST00000617576 1269 ntBASIC24.83■■□□□ 1.57
MT-ND3P03897 DUX4L22-201ENST00000618238 1269 ntBASIC24.83■■□□□ 1.57
MT-ND3P03897 DUX4L20-201ENST00000619712 1269 ntBASIC24.83■■□□□ 1.57
MT-ND3P03897 DUX4L21-201ENST00000622058 1269 ntBASIC24.83■■□□□ 1.57
MT-ND3P03897 DUX4L10-201ENST00000622460 1267 ntBASIC24.83■■□□□ 1.57
MT-ND3P03897 DUX4L25-201ENST00000624915 1269 ntBASIC24.83■■□□□ 1.57
MT-ND3P03897 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
MT-ND3P03897 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
MT-ND3P03897 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
MT-ND3P03897 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
MT-ND3P03897 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
MT-ND3P03897 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.81■■□□□ 1.56
MT-ND3P03897 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
MT-ND3P03897 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.81■■□□□ 1.56
MT-ND3P03897 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
MT-ND3P03897 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.79■■□□□ 1.56
MT-ND3P03897 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
MT-ND3P03897 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
MT-ND3P03897 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.79■■□□□ 1.56
MT-ND3P03897 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
MT-ND3P03897 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.78■■□□□ 1.56
MT-ND3P03897 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
MT-ND3P03897 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
MT-ND3P03897 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
MT-ND3P03897 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.78■■□□□ 1.56
MT-ND3P03897 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
MT-ND3P03897 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
MT-ND3P03897 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
MT-ND3P03897 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
MT-ND3P03897 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
MT-ND3P03897 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
MT-ND3P03897 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
MT-ND3P03897 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
MT-ND3P03897 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.77■■□□□ 1.56
MT-ND3P03897 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.77■■□□□ 1.56
MT-ND3P03897 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
MT-ND3P03897 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.77■■□□□ 1.56
MT-ND3P03897 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.77■■□□□ 1.56
MT-ND3P03897 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
MT-ND3P03897 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
MT-ND3P03897 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
MT-ND3P03897 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.75■■□□□ 1.55
MT-ND3P03897 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
MT-ND3P03897 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
MT-ND3P03897 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.75■■□□□ 1.55
MT-ND3P03897 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.75■■□□□ 1.55
MT-ND3P03897 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
MT-ND3P03897 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
MT-ND3P03897 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
MT-ND3P03897 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.75■■□□□ 1.55
MT-ND3P03897 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
MT-ND3P03897 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
MT-ND3P03897 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
MT-ND3P03897 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
MT-ND3P03897 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
MT-ND3P03897 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
MT-ND3P03897 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
MT-ND3P03897 AC142472.1-201ENST00000612013 1741 ntBASIC24.73■■□□□ 1.55
MT-ND3P03897 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.73■■□□□ 1.55
MT-ND3P03897 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.73■■□□□ 1.55
MT-ND3P03897 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.72■■□□□ 1.55
MT-ND3P03897 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
MT-ND3P03897 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.72■■□□□ 1.55
MT-ND3P03897 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
MT-ND3P03897 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
MT-ND3P03897 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
MT-ND3P03897 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.71■■□□□ 1.55
MT-ND3P03897 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
MT-ND3P03897 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
MT-ND3P03897 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
MT-ND3P03897 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
MT-ND3P03897 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.7■■□□□ 1.54
MT-ND3P03897 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
MT-ND3P03897 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
MT-ND3P03897 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
MT-ND3P03897 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
MT-ND3P03897 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.69■■□□□ 1.54
MT-ND3P03897 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
MT-ND3P03897 AC110285.7-201ENST00000624417 1536 ntBASIC24.68■■□□□ 1.54
MT-ND3P03897 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
MT-ND3P03897 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
MT-ND3P03897 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.67■■□□□ 1.54
MT-ND3P03897 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
MT-ND3P03897 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
MT-ND3P03897 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
MT-ND3P03897 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
MT-ND3P03897 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.66■■□□□ 1.54
MT-ND3P03897 WHAMMP3-201ENST00000611636 1609 ntBASIC24.66■■□□□ 1.54
MT-ND3P03897 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.66■■□□□ 1.54
MT-ND3P03897 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
MT-ND3P03897 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
MT-ND3P03897 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.65■■□□□ 1.54
MT-ND3P03897 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
MT-ND3P03897 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
MT-ND3P03897 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
MT-ND3P03897 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
MT-ND3P03897 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
MT-ND3P03897 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.64■■□□□ 1.54
MT-ND3P03897 HSD17B1P1-201ENST00000590052 955 ntBASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms