Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.69■■□□□ 1.38
KRT6AP02538 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
KRT6AP02538 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KRT6AP02538 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
KRT6AP02538 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
KRT6AP02538 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
KRT6AP02538 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
KRT6AP02538 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.68■■□□□ 1.38
KRT6AP02538 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.68■■□□□ 1.38
KRT6AP02538 DUSP8P4-201ENST00000399538 1761 ntBASIC23.68■■□□□ 1.38
KRT6AP02538 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
KRT6AP02538 ABHD17AP4-201ENST00000411545 909 ntBASIC23.67■■□□□ 1.38
KRT6AP02538 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
KRT6AP02538 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.67■■□□□ 1.38
KRT6AP02538 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KRT6AP02538 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
KRT6AP02538 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KRT6AP02538 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KRT6AP02538 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.67■■□□□ 1.38
KRT6AP02538 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KRT6AP02538 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KRT6AP02538 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRT6AP02538 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRT6AP02538 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRT6AP02538 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
KRT6AP02538 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KRT6AP02538 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KRT6AP02538 HLA-V-202ENST00000446817 847 ntBASIC23.65■■□□□ 1.38
KRT6AP02538 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.65■■□□□ 1.38
KRT6AP02538 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
KRT6AP02538 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
KRT6AP02538 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KRT6AP02538 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KRT6AP02538 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
KRT6AP02538 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KRT6AP02538 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.63■■□□□ 1.37
KRT6AP02538 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT6AP02538 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT6AP02538 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT6AP02538 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.62■■□□□ 1.37
KRT6AP02538 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KRT6AP02538 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
KRT6AP02538 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.62■■□□□ 1.37
KRT6AP02538 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KRT6AP02538 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
KRT6AP02538 CR559946.2-201ENST00000623684 991 ntBASIC23.62■■□□□ 1.37
KRT6AP02538 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
KRT6AP02538 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT6AP02538 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
KRT6AP02538 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.61■■□□□ 1.37
KRT6AP02538 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT6AP02538 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT6AP02538 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.6■■□□□ 1.37
KRT6AP02538 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
KRT6AP02538 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT6AP02538 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT6AP02538 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
KRT6AP02538 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT6AP02538 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.59■■□□□ 1.37
KRT6AP02538 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KRT6AP02538 AL359258.2-201ENST00000564063 1566 ntBASIC23.59■■□□□ 1.37
KRT6AP02538 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.59■■□□□ 1.37
KRT6AP02538 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.59■■□□□ 1.37
KRT6AP02538 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
KRT6AP02538 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
KRT6AP02538 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
KRT6AP02538 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.58■■□□□ 1.37
KRT6AP02538 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
KRT6AP02538 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
KRT6AP02538 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT6AP02538 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT6AP02538 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.57■■□□□ 1.36
KRT6AP02538 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT6AP02538 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.57■■□□□ 1.36
KRT6AP02538 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT6AP02538 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT6AP02538 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.56■■□□□ 1.36
KRT6AP02538 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KRT6AP02538 MIR3648-2-201ENST00000581792 180 ntBASIC23.56■■□□□ 1.36
KRT6AP02538 MIR3648-1-201ENST00000615959 180 ntBASIC23.56■■□□□ 1.36
KRT6AP02538 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.56■■□□□ 1.36
KRT6AP02538 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT6AP02538 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT6AP02538 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT6AP02538 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT6AP02538 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.55■■□□□ 1.36
KRT6AP02538 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
KRT6AP02538 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT6AP02538 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.54■■□□□ 1.36
KRT6AP02538 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.54■■□□□ 1.36
KRT6AP02538 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.53■■□□□ 1.36
KRT6AP02538 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT6AP02538 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
KRT6AP02538 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT6AP02538 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
KRT6AP02538 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KRT6AP02538 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
KRT6AP02538 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT6AP02538 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.52■■□□□ 1.36
KRT6AP02538 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms