Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN1O95832 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN1O95832 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.97■■□□□ 1.11
CLDN1O95832 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN1O95832 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.96■■□□□ 1.11
CLDN1O95832 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN1O95832 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN1O95832 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN1O95832 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CLDN1O95832 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN1O95832 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.95■■□□□ 1.11
CLDN1O95832 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN1O95832 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN1O95832 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN1O95832 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.95■■□□□ 1.1
CLDN1O95832 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CLDN1O95832 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CLDN1O95832 AC239859.2-201ENST00000444165 318 ntBASIC21.94■■□□□ 1.1
CLDN1O95832 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN1O95832 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN1O95832 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.93■■□□□ 1.1
CLDN1O95832 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN1O95832 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN1O95832 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN1O95832 AC018755.3-202ENST00000596210 929 ntBASIC21.93■■□□□ 1.1
CLDN1O95832 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CLDN1O95832 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN1O95832 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN1O95832 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN1O95832 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.92■■□□□ 1.1
CLDN1O95832 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN1O95832 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CLDN1O95832 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN1O95832 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CLDN1O95832 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.91■■□□□ 1.1
CLDN1O95832 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN1O95832 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.91■■□□□ 1.1
CLDN1O95832 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.91■■□□□ 1.1
CLDN1O95832 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN1O95832 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.91■■□□□ 1.1
CLDN1O95832 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN1O95832 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.91■■□□□ 1.1
CLDN1O95832 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CLDN1O95832 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CLDN1O95832 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.9■■□□□ 1.1
CLDN1O95832 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN1O95832 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN1O95832 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLDN1O95832 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLDN1O95832 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.89■■□□□ 1.09
CLDN1O95832 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN1O95832 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN1O95832 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.88■■□□□ 1.09
CLDN1O95832 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.88■■□□□ 1.09
CLDN1O95832 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN1O95832 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.88■■□□□ 1.09
CLDN1O95832 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN1O95832 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN1O95832 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.88■■□□□ 1.09
CLDN1O95832 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.88■■□□□ 1.09
CLDN1O95832 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.88■■□□□ 1.09
CLDN1O95832 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.88■■□□□ 1.09
CLDN1O95832 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.88■■□□□ 1.09
CLDN1O95832 ST7-AS1-201ENST00000456775 1889 ntBASIC21.88■■□□□ 1.09
CLDN1O95832 MIR638-201ENST00000385237 100 ntBASIC21.87■■□□□ 1.09
CLDN1O95832 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.87■■□□□ 1.09
CLDN1O95832 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.87■■□□□ 1.09
CLDN1O95832 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN1O95832 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN1O95832 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN1O95832 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN1O95832 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CLDN1O95832 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN1O95832 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN1O95832 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN1O95832 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN1O95832 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN1O95832 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.85■■□□□ 1.09
CLDN1O95832 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.85■■□□□ 1.09
CLDN1O95832 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN1O95832 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.85■■□□□ 1.09
CLDN1O95832 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.85■■□□□ 1.09
CLDN1O95832 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.85■■□□□ 1.09
CLDN1O95832 MIR3960-201ENST00000583311 91 ntBASIC21.85■■□□□ 1.09
CLDN1O95832 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.85■■□□□ 1.09
CLDN1O95832 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN1O95832 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN1O95832 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN1O95832 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CLDN1O95832 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.84■■□□□ 1.09
CLDN1O95832 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.84■■□□□ 1.09
CLDN1O95832 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.84■■□□□ 1.09
CLDN1O95832 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CLDN1O95832 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN1O95832 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN1O95832 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN1O95832 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.83■■□□□ 1.09
CLDN1O95832 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.83■■□□□ 1.09
CLDN1O95832 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLDN1O95832 AC139426.1-201ENST00000568218 2529 ntBASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms