Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDRT1O95170 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDRT1O95170 AC005559.1-201ENST00000589661 871 ntBASIC21.72■■□□□ 1.07
CDRT1O95170 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDRT1O95170 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDRT1O95170 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CDRT1O95170 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDRT1O95170 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDRT1O95170 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDRT1O95170 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.7■■□□□ 1.06
CDRT1O95170 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.7■■□□□ 1.06
CDRT1O95170 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDRT1O95170 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDRT1O95170 SUZ12P1-203ENST00000578195 985 ntBASIC21.7■■□□□ 1.06
CDRT1O95170 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDRT1O95170 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDRT1O95170 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDRT1O95170 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.69■■□□□ 1.06
CDRT1O95170 AC135983.2-203ENST00000454486 1613 ntBASIC21.69■■□□□ 1.06
CDRT1O95170 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.69■■□□□ 1.06
CDRT1O95170 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDRT1O95170 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDRT1O95170 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDRT1O95170 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.69■■□□□ 1.06
CDRT1O95170 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.69■■□□□ 1.06
CDRT1O95170 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDRT1O95170 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDRT1O95170 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDRT1O95170 AC142381.3-201ENST00000568208 1670 ntBASIC21.69■■□□□ 1.06
CDRT1O95170 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDRT1O95170 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDRT1O95170 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDRT1O95170 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDRT1O95170 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.67■■□□□ 1.06
CDRT1O95170 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CDRT1O95170 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.67■■□□□ 1.06
CDRT1O95170 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.67■■□□□ 1.06
CDRT1O95170 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDRT1O95170 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDRT1O95170 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.66■■□□□ 1.06
CDRT1O95170 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.66■■□□□ 1.06
CDRT1O95170 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CDRT1O95170 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.66■■□□□ 1.06
CDRT1O95170 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.66■■□□□ 1.06
CDRT1O95170 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDRT1O95170 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDRT1O95170 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDRT1O95170 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDRT1O95170 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDRT1O95170 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDRT1O95170 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.65■■□□□ 1.06
CDRT1O95170 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDRT1O95170 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDRT1O95170 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDRT1O95170 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDRT1O95170 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDRT1O95170 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
CDRT1O95170 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDRT1O95170 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
CDRT1O95170 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDRT1O95170 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDRT1O95170 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDRT1O95170 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDRT1O95170 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDRT1O95170 AC108673.1-201ENST00000510422 1159 ntBASIC21.63■■□□□ 1.05
CDRT1O95170 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CDRT1O95170 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDRT1O95170 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDRT1O95170 AC142472.1-201ENST00000612013 1741 ntBASIC21.63■■□□□ 1.05
CDRT1O95170 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDRT1O95170 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CDRT1O95170 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDRT1O95170 WHAMMP2-203ENST00000563942 1603 ntBASIC21.62■■□□□ 1.05
CDRT1O95170 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDRT1O95170 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDRT1O95170 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDRT1O95170 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.62■■□□□ 1.05
CDRT1O95170 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDRT1O95170 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDRT1O95170 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.62■■□□□ 1.05
CDRT1O95170 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDRT1O95170 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDRT1O95170 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDRT1O95170 AL139125.2-201ENST00000623134 1869 ntBASIC21.61■■□□□ 1.05
CDRT1O95170 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDRT1O95170 MIR6090-201ENST00000622481 60 ntBASIC21.61■■□□□ 1.05
CDRT1O95170 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDRT1O95170 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.61■■□□□ 1.05
CDRT1O95170 AC133561.1-201ENST00000568600 2415 ntBASIC21.6■■□□□ 1.05
CDRT1O95170 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.6■■□□□ 1.05
CDRT1O95170 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDRT1O95170 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDRT1O95170 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDRT1O95170 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CDRT1O95170 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDRT1O95170 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDRT1O95170 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDRT1O95170 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.59■■□□□ 1.05
CDRT1O95170 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDRT1O95170 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms